The whitefly, Bemisia tabaci (Gennadius) is documented as a major pest on soybean. It was reported that whitefly response towards its hosts and their cultivars varies, and is mediated through various host-related factors. Considering the significance of leaf morphological characteristics in influencing the host–whitefly responses, the present investigation was conducted in screen-house conditions to study the prevailing variations in leaf morphological characteristics of soybean genotypes and their role in governing the adult whitefly attractiveness and oviposition preference. In the multiple-choice test, the whitefly population (eggs, nymphs and adults) was found to be lowest in moderately resistant genotypes (SL 1028 and SL 1074) compared to highly susceptible (DS 3105) and susceptible genotypes (SL 688, SL 958 and SL 1113). The foliar trichomes were characterized using scanning electron microscopy and leaf area, leaf lamina thickness and leaf shape data were acquired using standard procedures. To determine the factors involved in the resistance/susceptible responses towards whitefly, Pearson correlation was applied between the morphological characteristics and the whitefly population. The results show that the leaf area, trichome density, trichome length and trichome angle showed a significant positive correlation with the whitefly population, whereas leaf lamina thickness was negatively correlated. Thus, for developing whitefly-resistant germplasm, breeders should choose genotypes having narrow and thick leaves with sparse, short and flat trichomes.

Seed coat colour in adzuki bean is an important quality trait and closely associated with anthocyanin metabolism pathways. To further understand the inheritance of seed coat colour pattern, the inheritance between multiple seed coat colours and ivory seed were analysed using F1:2, F2:3 and F3:4 populations derived from five bi-parental crosses. The differences between ivory and red mottle on ivory are controlled by a single recessive R locus and RI locus, respectively. Green, light brown and golden are all dominant to red and governed by two loci. The B (brown) locus shows dominant epistasis over T locus. The R (red) locus was recessive epistasis to B (black), T (light brown), G (golden), GR (green) and RI (red mottle on ivory) loci. The new insight into the strong recessive epistasis of the R locus will be important for gene mapping and cloning, candidate gene functional validation and quality improvement in adzuki bean.

The genus Oxalis contains important species worldwide with great economic and edible values. However, the testing guidelines have not been furbished, especially in China. Oxalis germplasm, including 60 species and 125 varieties, was collected from home and abroad and extensive field trials and phenotypic observations were conducted along with quantitative taxonomy, observations, correlation analysis and cluster analysis. Under the test guidelines of the International Union for the Protection of New Plant Varieties (UPOV), general guidelines for testing for distinctness, uniformity, stability (DUS) of new plant varieties, and Japanese test guidelines for DUS of Oxalis, 96 test characteristics (38 qualitative characteristics, 28 quantitative characteristics and 30 pseudo-qualitative characteristics) were determined as DUS test characteristics of Oxalis. Each test characteristic was scientifically graded and accurately described, and standard varieties and characteristic diagrams were provided for some characteristics. The guidelines for testing DUS of new plant varieties of Oxalis provide a standard for examining and testing new varieties of plants.

Efficiently distinguishing various Syzygium cumini L. Skeels (jamun) accessions holds practical significance for selection purposes. This study concentrated on 15 superior genotypes of jamun from the North Western Indian Himalayas, selected for their pivotal horticultural traits. Drawn from a pool of 82 collected genotypes and assessed across two consecutive years (2019 and 2020), these genotypes underwent morphological evaluations utilizing a randomized block design replicated thrice. Concurrently, random amplified polymorphic DNA (RAPD) and inter simple sequence repeat (ISSR) markers were employed for molecular analysis. Substantial variations surfaced among genotypes, both in morphological traits and fruit biochemistry. Notably, tree 43 exhibited promise across multiple horticultural facets, encompassing fruit weight, length, pulp weight, pulp-to-seed ratio and pulp percentage. Conversely, tree 49 excelled in elevated levels of total soluble solids, total sugar and reducing sugar. While principal component analysis and cluster analysis unveiled modest genetic variability, RAPD and ISSR markers unveiled pronounced molecular-level polymorphism. Agglomerative hierarchical clustering delineated the genotypes into five distinct clusters. Cluster I encompassed two genotypes, cluster II embraced five while the largest group, cluster III, included six genotypes. Clusters IV and V highlighted individual genotypes, trees 43 and 54 respectively. In the molecular analysis, UPGMA clustering yielded two primary clusters, spotlighting the noteworthy similarity between genotypes trees 49 and 52 whereas, trees 40, 43, 44 and 48 stood distinct. The observed genetic diversity stands as a valuable resource with substantial potential to enrich diverse breeding initiatives. These salient genetic variations underscore the richness within the studied population, offering a valuable asset for focused future pursuits.

Neocinnamomum plants are evergreen shrubs or small trees belonging to the Neocinnamomeae tribe of the Lauraceae family. Their seeds are rich in fatty acids, and their leaves are often used in traditional Chinese medicine. Presently, only a few studies have been performed on Neocinnamomum plants; therefore, the genome-based phylogeny among Neocinnamomum species has not been determined, which limits the germplasm innovation of this genus. In this study, by the Illumina (next-generation sequencing) and third-generation sequencing technologies, the whole genomes of seven Neocinnamomum species samples were sequenced, their nuclear DNA (nrDNA) sequences were assembled and characterized, and their phylogeny was reconstructed. The results revealed four hypervariable regions (i.e. transcribed spacer regions) in the nrDNA sequences, among which the highest degree of variation was observed in the external transcribed spacer (ETS) region localized behind the 26S gene. A total of 27 insertions/deletions and 184 single-nucleotide polymorphisms, both localized mainly in the ETS and internal transcribed spacer regions, were identified. Phylogenetic trees were constructed based on the nrDNA sequences using the maximum likelihood (ML) and Bayesian inference (BI) methods with Caryodaphnopsis henryi as the outgroup. The ML tree divided the seven Neocinnamomum species into four clades. Clade I consisted of Neocinnamomum caudatum var. macrocarpum and Neocinnamomum caudatum, clade II included Neocinnamomum delavayi and Neocinnamomum mekongense, clade III included Neocinnamomum fargesii and a branch species of N. delavayi and clade IV included Neocinnamomum lecomtei, constituting a monophyletic and basal group. The BI tree shared the same topological structure as the ML tree, and all the support values of the BI tree were one except for that of one Neocinnamomum species (0.98). The results of this study provide new evidence regarding the phylogenetic evolution of the Neocinnamomum plants.

This study was designed to understand how drought stress impact on the physiological and molecular status of genetically diverse Lolium perenne L. (perennial ryegrass) populations. The sensitivities of the 36 perennial ryegrass populations were checked against PEG-6000-simulated drought stress by analysing physiological status. Afterward, drought-related gene expressions were evaluated under normal and stressed conditions. The drought stress significantly up-regulated the drought-related genes in P6, P10, P15 and P30, while no difference was observed in drought-sensitive ones. The results collectively showed that four populations (P6, P10, P15, P30) are tolerant to drought stress and activate drought-related genes. Genetic similarities of the populations were also monitored using microsatellite (SSR) markers. The ten SSR primers detected 38 alleles. Surprisingly, the drought-tolerant populations were classified into different groups by principal component (PCA) and cluster analysis, showing that they are genetically different. Moreover, four unique alleles were identified by two SSR primers (P-07, and P-08) in P6, P10 and P15. In addition, the drought-tolerant populations (P6, P10, P15, P30) can be used to develop new perennial ryegrass cultivars for areas having drought problems.

Ancho (width) chile peppers have economic, social, culinary and cultural importance in Mexico and worldwide. This chile type considers divergent subtypes that altogether have not been analysed and therefore their morphological diversity has not been systematically described. The objectives were to describe the morphological diversity of ancho pepper landraces from Mexico, to identify groups of similarity and to define the traits with the higher contribution to the total variation. Eighty-six landraces of ancho chile peppers (red, ‘mulatos’, ‘miahuatecos’, ‘cristalinos’ and ‘huacle’), collected in six states of Mexico, and two commercial controls were evaluated in two localities, in a simple randomized complete block experimental design. We recorded 76 morphological traits. Statistical analysis included a combined ANOVA, Pearson's correlation coefficient, discriminant analysis, principal components and clusters. The morphological diversity in ancho chile peppers was mainly made up of fruit width, fruit wall thickness, stem diameter, corolla length, seed weight per fruit, plant height, stem length and pubescence. We defined four groups, which made it possible to differentiate ancho chile peppers of Puebla and the huacle chile pepper of Oaxaca from populations collected in the north and ‘Bajío’ (midland) parts of Mexico. Ancho chile peppers of Mexico showed wide morphological differences according to the type of chile pepper and seed collection regions. The traits that contributed the greatest morphological diversity were fruit width, fruit wall thickness, stem diameter, corolla length, seed weight per fruit, plant height, stem length and pubescence.

Sheath rot is one of the most destructive emerging diseases of rice in Asia and a significant loss (20–85%) to rice production is caused by this disease under temperate agro-climatic conditions of Kashmir. Disease is more prevalent in higher belts of valley where Japonica rice cultivation is more common. Also, late-maturing varieties are more likely to be attacked by sheath rot disease of rice. Information regarding the occurrence and distribution of any pathogen and its variability in the field is very much essential to devise a suitable disease management programme against the particular pathogen. The isolates of Sarocladium oryzae tested in the present study exhibited considerable variation in cultural characteristics, morphology and pathogenicity. The resistant sources for sheath rot disease of rice were identified among the temperate germplasm of rice under a relatively high inoculum concentration and disease pressure of all the variable isolates of S. oryzae. Among 219 rice genotypes screened for resistance against S. oryzae under field conditions, 42 genotypes were further evaluated under controlled epiphytotic conditions against all the 18 isolates of S. oryzae. Four genotypes (SKUA-354, ORN-V4, GS-183, GS357) were finally selected with high resistance against sheath rot disease of rice which can be utilized as potential donors for the development of disease-resistant varieties of rice against sheath rot.

Yushania anceps is a temperate woody bamboo taxon of high socio-economic importance occurring in the sub-alpine zone of the western Himalayas. This study was carried out to delineate the potential distribution of Y. anceps in the western Himalayas through species distribution modelling (SDM), and genetic characterization using sequence-tagged microsatellite (STMS) markers. The present study revealed an endemic distribution of this species in the Uttarakhand Himalayas, with an estimated area of 211.59 km2. The maximum probability of occurrence was recorded in the moderately dense forests between the altitudinal ranges of 2500 and 2700 m. The model output was well supported with high values of different statistical measures, such as the AUC (0.911) and Kappa coefficient (K = 0.513). Environmental variables related to precipitation, temperature and topography were identified as the most contributory in current SDM. In addition, diversity measures, namely allelic richness (Ar), expected heterozygosity (He), and fixation index (FST), were calculated in five sampled populations with eight STMS markers, which indicated high genetic diversity (Ar = 4.24; He = 0.689) and little differentiation (FST = 0.062). The diversity maps displayed that the populations located in the Kumaon region captured relatively more genetic diversity than the Garhwal region. Further, genetic clustering and STRUCTURE analysis revealed a substantial level of genetic admixing across the analysed populations, and as a result, no sub-structuring was detected. Due to the rare and endemic distribution of Y. anceps, it requires immediate conservation measures, and the knowledge base generated here will be of paramount importance to forest managers, researchers and policymakers.

Indigofera oblongifolia Forssk. locally known as ‘Goilia or Jhil’, is an important underutilized leguminous browse shrub for small ruminants in hot arid region of India and traditionally utilized for its medicinal value. Its irregular patchy distribution was observed in depression of rocky areas, bunds of farmer fields and along the depression on the road sides in Jaisalmer and Pali district during collection. Soil samples collected from Pali district have high level of pH and electrical conductivity as compared to Jaisalmer which indicates its suitability to saline areas. It exhibited good plant growth under Jodhpur conditions with respect to plant height (171.5 cm), number of branches (47.9) and canopy diameter (100–210 and 115–180 cm in north-south and east-west direction, respectively) after 12 months of planting in fields under protected condition. Morphological characterization showed the presence of high coefficient of variation (%) in the number of raceme per branch (27.3) followed by raceme length (22.9), pod length (21.0) and least in pod width (8.1). Phytochemical results revealed that leaves of I. oblongifolia contained considerable amounts of total phenols (31.44 mg g−1), flavonoids (29.73 mg g−1) and antioxidant capacity (6.26 FRU g−1) which make its suitability as a browse species to ruminants in rangelands. Along with these finding, its traditional knowledge and utilization are detailed in this paper as to hasten further research on its various aspects for its sustainable utilization in rangelands or in alternate land use systems in the Indian hot arid region.

Sorghum (Sorghum bicolor (L.) Moench) is a dual nature crop, which is used for food as well as fodder, depending on plant ideotype. Sorghum forage is important for ruminants, but a major constraint is the anti-nutritional factor dhurrin, a hydrocyanic acid (HCN) producing glucoside. There are several additional effects of dhurrin, which reduce the nutritional value of sorghum fodder for livestock. This two-year study was aimed to evaluate the variation among diverse sorghum varieties, specifically for HCN content, forage yield and stem sugar content (brix value) under arid climate in Pakistan. Nine sorghum varieties were used for this experiment: JS-2002, Chakwal sorghum, Lines CS-17, Super late, PAK SS-2, Johar, JS-263, Sargodha-2011 and YSS-98. Results reveal that Sargodha-2011 had superior morphological traits for fresh forage and dry biomass yield, and stem brix value, compared to other varieties. Higher HCN contents were recorded in Super late compared to other varieties. Significant negative correlation of HCN with yield showed that improvement in yield will reduce the HCN content of sorghum. In conclusion, sorghum variety SGD-11 was shown best performing for higher biomass yield and brix value, and lower HCN content compared to other tested varieties under arid climate of Thal, Pakistan.

Ilex paraguariensis A. St.-Hil. (yerba mate) (Aquifoliaceae Bercht. & J. Presl) is a plant species with great economic and cultural importance because its leaves are processed and ground to make infusions like mate or tereré. The species is distributed in a continuous area that includes Southern Brazil and part of Paraguay and Argentina. Uruguay represents the Southern distribution limit of the species, where small populations can be found as part of ravine forests. Although there are previous reports of molecular markers for this and other species in the genus, the available markers were not informative enough to represent the intra- and interpopulation genetic diversity in marginal Uruguayan populations. In this study, we developed highly informative polymorphic microsatellite markers to be used in genetic studies in I. paraguariensis. Markers were identified in contigs from the genome sequence of two individuals and then tested for amplification and polymorphism content in a diverse panel. Markers which passed these filters were tested on populations from Uruguay. They detected higher diversity within populations (in terms of number of alleles and heterozygosity) than previously reported, and levels of heterozygosity similar to those reported for two Brazilian populations. This subset of seven markers were successfully multiplexed, substantially reducing the costs of the analysis. Combined with previously reported nuclear and plastid markers, they can be used to evaluate the genetic diversity of rear-edge populations, identify genotypes for paternity studies and provide relevant information for the conservation and management of germplasm.