Field experiments were conducted from 2011 to 2013 near Ridgetown and Exeter, Ontario, Canada to evaluate the tolerance of seven identity-preserved (IP) soybean cultivars to protoporphyrinogen oxidase (PPO)-inhibiting herbicides flumioxazin, saflufenacil/dimethenamid-P, and sulfentrazone applied PRE; fomesafen applied POST; as well as PRE followed by (fb) POST application. Ridgetown sites demonstrated excellent tolerance (< 10% injury) to PRE treatments, whereas PRE sulfentrazone caused up to 36% injury at 1 and 2 wk after application (WAA) at Exeter. Of the PRE fb POST treatments evaluated, those containing saflufenacil/dimethenamid-P and sulfentrazone were most injurious to soybean, with cultivar being a further determinant of injury. At Exeter 1 WAA, cultivars ‘S03W4’ and ‘S23T5’ showed 23 to 27 and 45 to 46% injury for saflufenacil/dimethenamid-P and sulfentrazone when followed by POST fomesafen, respectively. Sulfentrazone application (PRE alone or fb fomesafen) consequently reduced S03W4 yield up to 38% and S23T5 up to 25%, whereas saflufenacil/dimethenamid-P fb fomesafen reduced S03W4 by 18%. In general, PRE fb POST caused more injury than PRE treatments; however, injury diminished over time and no significant reduction to soybean yield could be attributed to adding POST fomesafen. On the basis of this study, the injury from PPO herbicides applied PRE is active ingredient, cultivar, and environment specific. Although PPO herbicides have the potential to cause unacceptable crop injury in some IP soybean cultivars, selecting a tolerant cultivar will minimize yield losses.