Microhabitat characteristics can be used as a proxy to predict the community structure of associated organisms and evaluate their vulnerability to habitat degradation. Microhabitat-specific and ectothermic taxa (like many reptiles) are among the best models to study responses to changing habitats and climate. We examined the niche breadth and guild structure of reptiles from Agasthyamalai Hills in the southern Western Ghats of India based on microhabitat use data. We recorded a total of 47 reptile species from 1,554 observations comprising two major orders and 11 families. Niche breadth analysis revealed that 45% of reptiles are microhabitat specialists, indicating the importance of protecting their habitats with all structural attributes. Cluster analysis grouped reptile species into four major guilds based on microhabitat preferences. The forest floor-dwelling guild was the largest group with 25 species, followed by the semi-arboreal guild with 12 species. The floor-dwelling guild also exhibited both the highest number of microhabitat specialists (n = 11) and globally threatened species (n = 3), highlighting the need for preserving ground cover characteristics such as leaf litter, boulders, and open ground for conserving reptiles in the region. Considering the microhabitat specializations within the community, we recommend a dynamic approach to monitor abundance, diversity, and habitat quality across the Agasthyamalai landscape to better conserve its rich reptile diversity.

Termites are essential components of tropical ecosystems, in which they provide fundamental ecosystem services, such as decomposition of dead plant material, fostering of soil mineralization and provisioning of new microhabitats. We investigated the termite communities of four habitats in two protected areas in West Africa, which differ in management effectiveness: the strictly protected Lamto Reserve (LR) and the Marahoué National Park (MNP), which suffers from anthropogenic disturbance despite its protection status. We tested the effect of disturbance on species composition, richness and abundance as well as on functional (feeding type) composition. The effect of disturbance was clearly visible in the termite communities. Compared to the LR, the MNP had less termite species overall and in all habitats except the shrub savannah. Also the abundance of termites was generally reduced and a decrease of soil feeders recorded. The latter is well-known to be sensitive to anthropogenic disturbance in forests. Comparing our results with other studies, we were able to identify suitable bioindicators of ecosystem health for West-African savannahs. Furthermore, we discuss the potential consequences of anthropogenic disturbance on ecosystem services provided by termites.

Root metrics and plant height for 256 excavated saplings and small trees of 27 species, including sown plants, were used to describe belowground structure and assess factors that influence shoot growth in a tropical dry forest (TDF) in Zambia. Models were developed to (i) estimate taproot depth from incomplete excavations and (ii) coarse lateral root biomass from proximal diameter data. The majority of the species studied are slow-growing and had a median height of <200 cm at the age of 16 years. Root development advanced sequentially from taproot elongation to thickening to coarse lateral root development. Shrubs in shallow soil had short taproots with a lower wood density. Plant age explained <10% of the variance in shoot height. Root variables explained the majority of the variance in shoot height. More research is needed to improve our knowledge about how belowground structures influence shoot growth and tree recruitment in TDFs of southern Africa.

The conservation of tropical biodiversity depends not only on forest remnants, but also on anthropogenic land covers. Some shade crops are considered wildlife-friendly agroecosystems, but their conservation value is context- and taxon-dependent. Amphibians and reptiles have received less attention despite their high sensitivity to habitat disturbance. We determined the conservation value of lightly-harvested rustic cocoa plantations for herpetofauna in the Lacandona region, Mexico. We compared 12 environmental variables between habitats. Then, we compared the abundance, species number and composition of amphibian and reptile assemblages. Within each habitat, we explored the relationships between environmental variables and abundance and species number. Tree density, litter cover and litter depth were higher in cocoa. Abundance of reptiles and amphibians were higher in cocoa than forest; species number did not differ. Habitat explained some of the variation (8%) in assemblage composition. In cocoa, amphibian abundance was positively related to canopy height and the presence of a humus layer, while reptile abundance was negatively related to relative humidity. We conclude that lightly-used rustic cocoa plantations can be suitable habitat for forest herpetofauna. As long as cocoa plantations do not replace existing forest cover, they can play an important role in the design of wildlife-friendly tropical landscapes.

Actinobacteria that live mutualistically with leaf-cutter ants secrete antibiotics that may induce antibiotic resistance in nearby soil bacteria. We tested for the first time whether soil bacteria near and inside Atta cephalotes nests in Costa Rica show higher levels of antibiotic resistance than bacteria collected farther away. We collected soil samples 0 m to 50 m away from ant nests and grew bacteria from them on agar with paper discs treated with antibiotics of common veterinary use. As a proxy for antibiotic resistance, we measured the distance from the edge of each disc to the closest bacterial colonies. In general, resistance to oxytetracycline increased with proximity to leaf-cutter ant nests. Antibiotic resistance to oxytetracycline was also higher in samples collected inside the nest than in samples from the nest mound; not all antibiotics demonstrated the same trend. A preliminary exploratory morphological analysis suggests bacterial communities between 0 m and 50 m from ant nests were similar in diversity and abundance, indicating the pattern of antibiotic resistance described above may not be caused by differences in community composition. We conclude that actinobacteria living mutualistically with A. cephalotes drive natural antibiotic resistance to tetracycline in proximal bacterial communities.

Vessel diameter variation along the hydraulic pathway determines how much water can be moved against the force of gravity from roots to leaves. While it is well-documented that tree size scales with vessel diameter variation at the stem base due to the effect of basipetal vessel widening, much less is known whether this likewise applies to terminal sun-exposed twigs. To analyze the effect of tree height on twig xylem anatomy, we compiled data for 279 tropical rainforest tree species belonging to 56 families in the lowlands of Jambi Province, Indonesia. Terminal upper-canopy twigs of fully grown individuals were collected and used for wood anatomical analysis.

We show that hydraulically weighted vessel diameter (Dh) and potential hydraulic conductivity (Kp) of upper canopy twigs increase with tree height across species although the relationship was weak. When averaged across given tree height classes irrespectively of species identity, however, a strong dependency of tree height on Dh and Kp was observed, but not on the lumen-to-sapwood area ratio (Al:Ax) or vessel density (VD).

According to the comparison between actual tree height and the maximum tree height reported for a given species in the stand, we show that the vascular xylem anatomy of their terminal twigs reflects their canopy position and thus ecological niche (understory versus overstory) at maturity. We conclude that the capacity to move large quantities of water during the diurnal peak in evaporative demand is a prerequisite for growing tall in a humid tropical environment.

Understanding how and why exotic species use their habitats is crucial for defining effective conservation strategies. We aimed to investigate habitat use by an exotic population of squirrel monkeys living in an Atlantic Forest fragment and identify factors associated with their habitat preferences. Over 6 months of scan sampling observations, we collected data on native and exotic plants consumed by the squirrel monkeys, food availability, and interactions between the squirrel monkeys and the native common marmosets. We also georeferenced the estimated centroid point of the study group during each scan. Squirrel monkeys used Secondary Old Forest habitats more often than the other habitats available. The consumption of native and exotic plants and the association with common marmoset appear to have influenced the habitat use of the exotic squirrel monkeys; however, the choice habitat did not demonstrate to be associated with food availability. The exotic squirrel monkeys preferred to use less disturbed habitats to consume a high amount of food (often associated with the common marmoset), potentially optimizing their food intake. Our findings demonstrated the adaptive success of an exotic primate in its non-natural habitat and the key role of the plant community in maintaining this population.

Despite their key role in biodiversity conservation, forests in the Congo Basin are increasingly threatened by human activities, but it remains challenging to assess the impact of forest degradation under a more or less intact canopy. Likewise, forest recovery following agricultural abandonment remains poorly understood in the Congo Basin. Here, we surveyed 125 vegetation quadrats across 25 forest inventory plots in the Yangambi area. We aimed to find associations between both selective logging and forest recovery, and a range of forest community and tree community trait characteristics, as compared to reference undisturbed old-growth forest. We found that plots in undisturbed old-growth forest harboured both more tree individuals and tree species with a higher wood density as compared to plots in disturbed old-growth forest. In addition, their tree community composition was significantly different, whereas species diversity recovered since relatively recent agricultural abandonment (< 60 years), community composition and forest structure remained significantly different from the plots in undisturbed old-growth forest. Our study provides some insights into the rate of forest recovery in the Congo basin after agricultural abandonment and highlights the need of proper conservation of the remaining relatively undisturbed old-growth forests. Finally, we stress the need for more extensive vegetation surveys in the Congo Basin to further unravel the effects of anthropogenic disturbance.

Snakes are sensitive to both environmental and climate gradients. To design conservation plans, a scientific understanding of snake habitats in light of environmental and climatic variables is an essential prerequisite. For venomous snakes, denoting favourable habitats should also be relevant for snakebite management. We have considered 18 spatial variables to portray the range of terrestrial venomous snake distribution in Bangladesh. Our results indicate that the distribution of 29 studied venomous snakes in this country is primarily driven by climatic and environmental variables. We found that especially low elevation and flood risk constrain the distribution of those terrestrial snakes, i.e. regular floods in central Bangladesh push venomous snakes towards the edges of the country. Moreover, none of these species occupies the whole of its anticipated climatically favourable area. Projections into the future indicated that 11 studied species, Amphiesma platyceps, Boiga siamensis, Chrysopelea ornata, Pseudoxenodon macrops, Rhabdophis himalayanus, Rhabdophis subminiatus, Bungarus lividus, Ophiophagus hannah, Daboia russelii, Ovophis monticola and Trimeresurus popeiorum will lose their entire climatically suitable area within the country. Therefore, we suggest establishing more protected areas in the hilly ecosystems in the eastern part and in the mangrove forests in the south-western corner of Bangladesh to mitigate future extinction risks, such as climate change, sea-level rise and increase in flood severity. Conserving village forests and croplands, which are subject to rapid change, will also need to be addressed equally, as these are inhabited by almost one-third of the studied species. The occurrence of the cobras and kraits in village forests and cropland dominant habitats demands more attention to minimise snakebite related mortality and morbidity.

Daily heterothermy is a strategy employed by endothermic birds and mammals to reduce their energetic costs by lowering their metabolic rate. We recorded nocturnal and diurnal rectal temperatures in three Moroccan Gerbillus rodent species to determine the level of heterothermy. A decrease in body temperature from night to day was observed by an average (±SD) of 8.7 (±4.2) in G. gerbillus, 11.1 (±3.0) in G. amoenus, and 7.7 (±3.3)°C in G. sp.1, the first records of heterothermy in the three species. The findings support a prediction that daily heterothermy is found in mammals from arid and semi-arid regions, contributing to further knowledge of thermoregulation in desert rodents.

Cyclopes didactylus, the smallest of all anteaters, inhabits Amazonian and Atlantic forests with an apparently disjunct distribution. Yet, phylogeography reveals historical connections through the forests of the Northeast Region of Brazil. Its populations in this region are classified by the Red List of Threatened Species as Data Deficient and with a trend towards decline. However, Northeast Brazil has a large sampling gap, and the potential distribution of this species has yet to be evaluated. We investigated the potential distribution of C. didactylus to evaluate the hypothesis of a disjunct distribution between Amazonian and Atlantic forests and estimate the amount of protected area in its predicted distribution. We generated a Maxent distribution model using occurrence records, according to the new taxonomic revision of Cyclopes, and selected current bioclimatic variables to evaluate the continuity of the predicted distribution of the species in Northeast Brazil. We also performed past projections to assess historical connections and overlapped maps of protected areas onto their current distribution. Although its distribution is probably disjunct, at least one as-yet-unknown population may be present in the forests of Northeast Brazil, an area poorly protected. The results are useful for targeting field efforts in this under-sampled region.

The home-field advantage (HFA) hypothesis establishes that plant litter decomposes faster at ‘home’ sites than in ‘away’ sites due to more specialized decomposers acting at home sites. This hypothesis has predominantly been tested through ‘yes or no’ transplanting experiments, where the litter decomposition of a focal species is quantified near and away from their conspecifics. Herein, we evaluated the occurrence and magnitude of home-field effects on the leaf litter decomposition of Myrcia ramuliflora (O.Berg) N. Silveira (Myrtaceae) along a natural gradient of conspecific litterfall input and also if home-field effects are affected by litter and soil traits. Litter decomposition of M. ramuliflora was assessed through litterbags placed in 39 plots in a tropical heath vegetation over a period of 12 months. We also characterized abiotic factors, litter layer traits, and litter diversity. Our results indicated the occurrence of positive (i.e. Home-field advantage) and negative (i.e. Home-field disadvantage) effects in more than half of the plots. Positive and negative effects occurred in a similar frequency and magnitude. Among all predictors tested, only the community weighted mean C/N ratio of the litterfall input was associated with home-field effects. Our results reinforce the lack of generality for home-field effects found in the literature and thus challenge the understanding of litter-decomposer interaction in tropical ecosystems.

The den is a multi-purpose critical space of carnivores and provides a growth conducive refuge which ensures both substances and protection from interspecific predation and harsh climate. Selection of optimal den sites determined by various site-specific factors potentially reduces aversive interspecific interactions and provides cost-effective access to food sources. In this study, we have assessed the factors determining the den site selection by a small population of striped hyaena, Hyaena hyaena in a shared landscape dominated by large carnivores. We assessed den site selection as a function of vegetation patch characteristics, site-specific anthropogenic threats/activities and topographical variables using Bayesian algorithm through field collected binomial data on den use by the species. Our model suggested that hyaenas select rocky refugia surrounded by trees and tall grasses, situated on mountain slopes proximate to a water body. Our study consolidated the importance of undulating terrain in the species ecology and postulated the slope as an ‘energy-expensive’ terrain that refrains frequent movement of other carnivores, in turn providing more affordable denning space for the striped hyaena. This study provides critical information on denning ecology of last remaining major breeding population striped hyaena of southern India.

One of the many ecosystem services provided by dung beetles is that of secondary seed dispersal. This paper experimentally evaluates the effectiveness of this service using the chimpanzee–dung beetle seed dispersal system in Taï National Park, Côte d’Ivoire. The study focussed on the germination rate and success of four species of seeds contained in the faeces of Pan troglodytes verus: Dacryodes klaineana (Pierre) H.J. Lam, Diospyros mannii Hiern, Pycnanthus angolensis (Welw.) Warb., and Uapaca guineensis Muell. Arg. For each species, 600 seeds, half from chimpanzee faeces and half from mother trees, were sown in nurseries at depths of 0, 2, 5, 10, and 15 cm (i.e. 120 seeds per depth; 60 from chimp and 60 from mother trees). After germination, only the seeds of Uapaca guineensis and Diospyros mannii sown at 2 and 5 cm had a >14% rate (between 14.2 and 30.8%) of germination and seedling establishment, regardless of seed origin. An increase in the depth of seed burial appears to negatively affect the probability of seedling emergence and establishment. This study shows that dung beetles have positive impacts on seed fate. However, for these plant species, the chimpanzee’s role is limited to that of primary seed dispersal.