Hostname: page-component-848d4c4894-p2v8j Total loading time: 0 Render date: 2024-04-30T10:59:23.960Z Has data issue: false hasContentIssue false

Genetic crossover interference in the human genome

Published online by Cambridge University Press:  26 April 2001

S. LIN
Affiliation:
Department of Statistics and Division of Human Cancer Genetics, Ohio State University, Columbus, OH 43210, USA
R. CHENG
Affiliation:
Department of Statistics and Division of Human Cancer Genetics, Ohio State University, Columbus, OH 43210, USA
F. A. WRIGHT
Affiliation:
Department of Statistics and Division of Human Cancer Genetics, Ohio State University, Columbus, OH 43210, USA
Get access

Abstract

Positive crossover interference refers to the phenomenon that the occurrence of a crossover reduces the probability of another crossover in its vicinity. There have been studies reporting the presence of positive interference in humans. Some studies have also found evidence suggesting within and between chromosomal interference heterogeneity on some of the chromosomes. However, there has been no systematic study of interference and interference heterogeneity in the whole human genome, using pedigree data without first inferring crossovers. In this paper, we studied the Chi-square interference model and other models extensively to compare the relative performance of each of these models for accounting for interference and measuring strength of interference. Our results showed that the Chi-square model consistently fitted the data well and provided easily interpretable estimates of interference strength. The Chi-square model was then used to study interference and interference heterogeneity within and between chromosomes. We found strong evidence of positive interference in the whole human genome. Our results also indicated that the level of interference was fairly constant in most parts of the genome, but there was some evidence suggesting that the levels of interference for two of the chromosomes were different from the rest. We also found evidence of within chromosomal interference heterogeneity for several of the chromosomes.

Type
Research Article
Copyright
University College London 2001

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)