Skip to main content Accessibility help
×
Hostname: page-component-77c89778f8-swr86 Total loading time: 0 Render date: 2024-07-20T03:18:52.793Z Has data issue: false hasContentIssue false

Appendix 2 - Glossary

Published online by Cambridge University Press:  05 June 2012

Jin Xiong
Affiliation:
Texas A & M University
Get access

Summary

  1. Ab initio prediction: computational prediction based on first principles or using the most elementary information.

  2. Accession number: unique number given to an entry in a biological database, which serves as a permanent identifier for the entry.

  3. Agglomerative clustering: microarray data clustering method that begins by first clustering the two most similar data points and subsequently repeating the process to merge groups of data successively according to similarity until all groups of data are merged. This is in principle similar to the UPGMA phylogenetic approach.

  4. Alternative splicing: mRNA splicing event that joins different exons from a single gene to form variable transcripts. This is one of the mechanisms of generating a large diversity of gene products in eukaryotes.

  5. Bayesian analysis: statistical method using the Bayes theorem to describe conditional probabilities of an event. It makes inferences based on initial expectation and existing observations. Mathematically, it calculates the posterior probability (revised expectation) of two joint events (A and B) as the product of the prior probability of A event given the condition B (initial expectation) and conditional probability of B (observation) divided by the total probability of event A with and without the condition B. The method has wide applications in bioinformatics from sequence alignment and phylogenetic tree construction to microarray data analysis.

  6. Bioinformatics: discipline of storing and analyzing biological data using computational techniques. More specifically, it is the analysis of the sequence, structure, and function of the biological macromolecules – DNA, RNA, and proteins – with the aid of computational tools that include computer hardware, software, and the Internet.

  7. […]

Type
Chapter
Information
Publisher: Cambridge University Press
Print publication year: 2006

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

Save book to Kindle

To save this book to your Kindle, first ensure coreplatform@cambridge.org is added to your Approved Personal Document E-mail List under your Personal Document Settings on the Manage Your Content and Devices page of your Amazon account. Then enter the ‘name’ part of your Kindle email address below. Find out more about saving to your Kindle.

Note you can select to save to either the @free.kindle.com or @kindle.com variations. ‘@free.kindle.com’ emails are free but can only be saved to your device when it is connected to wi-fi. ‘@kindle.com’ emails can be delivered even when you are not connected to wi-fi, but note that service fees apply.

Find out more about the Kindle Personal Document Service.

  • Glossary
  • Jin Xiong, Texas A & M University
  • Book: Essential Bioinformatics
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511806087.022
Available formats
×

Save book to Dropbox

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Dropbox.

  • Glossary
  • Jin Xiong, Texas A & M University
  • Book: Essential Bioinformatics
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511806087.022
Available formats
×

Save book to Google Drive

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

  • Glossary
  • Jin Xiong, Texas A & M University
  • Book: Essential Bioinformatics
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511806087.022
Available formats
×