Skip to main content Accessibility help
×
Hostname: page-component-76fb5796d-2lccl Total loading time: 0 Render date: 2024-04-25T14:50:15.940Z Has data issue: false hasContentIssue false

4 - Thermophilic bacteria in cool soils: metabolic activity and mechanisms of dispersal

from Part II - Prokaryotes

Published online by Cambridge University Press:  05 August 2012

Roger Marchant
Affiliation:
University of Ulster
Ibrahim M. Banat
Affiliation:
University of Ulster
Andrea Franzetti
Affiliation:
University of Milano-Bicocca
Diego Fontaneto
Affiliation:
Imperial College London
Get access

Summary

Introduction

The biogeographic patterns of plants and animals, i.e. the distribution of biodiversity over space and time has been studied for many years; however, the question whether microorganisms display similar biogeographic patterns remains unanswered (Fenchel et al., 1997). A fundamental assumption that ‘everything is everywhere, but the environment selects’ was generally promulgated by the Dutch microbiologist Martinus Wilhelm Beijerinck early in the twentieth century and further supported by Baas Becking in 1934. This hypothesis strongly influenced the scientific community throughout the century, leading to widespread acceptance (O'Malley 2008). If the environment is indeed responsible for ‘selecting’ the organisms in a particular habitat, then we should expect to be able to identify the specific controlling factors for particular organisms. As a consequence of this speculation and as suggested by the literature and experience, the presence of thermophilic bacteria is to be expected in hot environments, from which many of these organisms have been indeed isolated. However, the presence of thermophilic bacteria in cooler environments has been known for many years but few investigations have been carried out to assess their physiology, their ecological roles and to interpret their presence in the framework of biogeographic theory. In 2002 Marchant and colleagues initiated the investigation of the occurrence of highly thermophilic bacteria in cool soil environments, isolating five bacterial strains able to grow aerobically only above 40°C, a temperature never achieved in these soils.

Type
Chapter
Information
Biogeography of Microscopic Organisms
Is Everything Small Everywhere?
, pp. 43 - 58
Publisher: Cambridge University Press
Print publication year: 2011

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Amann, R.I., Binder, B.J., Olson, R.J. et al. (1990). Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Applied Environmental Microbiology 56, 1919–1925.Google ScholarPubMed
Banat, I.M., Marchant, R., Rahman, T.J. (2004). Geobacillus debilis sp. nov., a novel obligately thermophilic bacterium isolated from a cool soil environment, and reassignment of Bacillus pallidus to Geobacillus pallidus comb. nov. International Journal of Systematics and Evolutionary Microbiology 54, 2197–2201.CrossRefGoogle ScholarPubMed
Boopathy, R. (2000). Factors limiting bioremediation technologies. Bioresource Technology 74, 63–67.CrossRefGoogle Scholar
Caracciolo, A.B., Grenni, P., Cupo, C., Rossetti, S. (2005). In situ analysis of native microbial communities in complex samples with high particulate loads. FEMS Microbiology Letters 253, 55–58.CrossRefGoogle Scholar
Fenchel, T., Esteban, G.F., Finlay, B.J. (1997). Local versus global diversity of microorganisms: cryptic diversity of ciliated protozoa. Oikos 80, 220–225.CrossRefGoogle Scholar
Griffin, D.W., Kellogg, C.A., Garrison, V.H., Shinn, E.A. (2002). The global transport of dust. American Scientist 90, 228–235.CrossRefGoogle Scholar
Harmsen, H., Prieur, D., Jeanthon, C. (1997). Group-specific 16S rRNA-targeted oligonucleotide probes to identify thermophilic bacteria in marine hydrothermal vents. Applied and Environmental Microbiology 63, 4061–4068.Google ScholarPubMed
Hughes Martiny, J.B., Bohannan, B.J.M., Brown, J.H. et al. (2006). Microbial biogeography: putting microorganisms on the map. Nature Reviews Microbiology 4, 102–112.CrossRefGoogle Scholar
Marchant, R., Banat, I.M., Rahman, T.J., Berzano, M. (2002a). The frequency and characteristics of highly thermophilic bacteria in cool soil environments. Environmental Microbiology 4, 595–602.CrossRefGoogle ScholarPubMed
Marchant, R., Banat, I.M., Rahman, T.J., Berzano, M. (2002b). What are high temperature bacteria doing in cold environments?Trends in Microbiology 10, 120–121.CrossRefGoogle ScholarPubMed
Marchant, R., Sharkey, F.H., Banat, I.M., Rahman, T.J., Perfumo, A. (2006). The degradation of n-hexadecane in soil by thermophilic geobacilli. FEMS Microbiology Ecology 56, 44–54.CrossRefGoogle ScholarPubMed
Marchant, R., Franzetti, A., Pavlostathis, S.G. et al. (2008). Thermophilic bacteria in cool temperate soils: are they metabolically active or continually added by global atmospheric transport?Applied Microbiology and Biotechnology 78, 841–852.CrossRefGoogle ScholarPubMed
Nazina, T.N., Tourova, T.P., Poltaraus, A.B. et al. (2001). Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans. International Journal of Systematics and Evolutionary Microbiology 51, 433–446.CrossRefGoogle Scholar
Nazina, T.N., Lebedeva, E.V., Poltaraus, A.B. et al. (2004). Geobacillus gargensis sp. nov., a novel thermophile from a hot spring, and the reclassification of Bacillus vulcani as Geobacillus vulcani comb. nov. International Journal of Systematics and Evolutionary Microbiology 54, 2019–2024.CrossRefGoogle ScholarPubMed
Nazina, T.N., Sokolova, D.S., Grigoryan, A.A. et al. (2005). Geobacillus jurassicus sp. nov., a new thermophilic bacterium isolated from a high-temperature petroleum reservoir, and the validation of the Geobacillus species. Systematic and Applied Microbiology 28, 43–53.CrossRefGoogle ScholarPubMed
O'Malley, M.A. (2008). Everything is everywhere: but the environment selects: ubiquitous distribution and ecological determinism in microbial biogeography. Studies in History and Philosophy of Biological and Biomedical Sciences 39, 314–325.CrossRefGoogle ScholarPubMed
Pavlostathis, S.G., Marchant, R., Banat, I.M., Ternan, N.G., McMullan, G. (2006). High growth rate and substrate exhaustion results in rapid cell death and lysis in the thermophilic bacterium Geobacillus thermoleovorans. Biotechnology and Bioengineering 95, 84–95.CrossRefGoogle ScholarPubMed
Perfumo, A., Marchant, R. (2010). Global transport of thermophilic bacteria in atmospheric dust. Environmental Microbiology Reports 2, 333–339.CrossRefGoogle ScholarPubMed
Perfumo, A., Banat, I.M., Marchant, R., Vezzulli, L. (2007). Thermally enhanced approaches for bioremediation of hydrocarbon-contaminated soils. Chemosphere 66, 179–184.CrossRefGoogle ScholarPubMed
Pernthaler, J., Glöckner, F-O., Schönhuber, W., Amann, R. (2001). Fluorescence in situ hybridization (FISH) with rRNA-targeted oligonucleotide probes. Methods in Microbiology 30, 207–226.CrossRefGoogle Scholar
Rahman, T.J., Marchant, R., Banat, I.M. (2004). Distribution and molecular investigation of highly thermophilic bacteria associated with cool soil environments. Biochemical Society Transactions 32, 209–213.CrossRefGoogle ScholarPubMed
Saffary, R., Nandakumar, R., Spencer, D. et al. (2002). Microbial survival of space vaccum and extreme ultraviolet irradiation: strain isolation and analysis during a rocket flight. FEMS Microbiology Letters 215, 163–168.CrossRefGoogle Scholar
Sung, M.-H., Kim, H., Bae, J.-W. et al. (2002). Geobacillus toebii sp nov., a novel thermophilic bacterium isolated from hay compost. International Journal of Systematics and Evolutionary Microbiology 52, 2251–2255.Google ScholarPubMed

Save book to Kindle

To save this book to your Kindle, first ensure coreplatform@cambridge.org is added to your Approved Personal Document E-mail List under your Personal Document Settings on the Manage Your Content and Devices page of your Amazon account. Then enter the ‘name’ part of your Kindle email address below. Find out more about saving to your Kindle.

Note you can select to save to either the @free.kindle.com or @kindle.com variations. ‘@free.kindle.com’ emails are free but can only be saved to your device when it is connected to wi-fi. ‘@kindle.com’ emails can be delivered even when you are not connected to wi-fi, but note that service fees apply.

Find out more about the Kindle Personal Document Service.

Available formats
×

Save book to Dropbox

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Dropbox.

Available formats
×

Save book to Google Drive

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

Available formats
×