Peanut (Arachis hypogaea L.) and maize (Zea mays L.) are essential crops for Ghana’s economy and food security, but weed infestation poses a significant threat to their cultivation. Crop rotations influence weed communities, but little is known about these processes in peanut-cropping systems in West Africa. This study investigated the impact of different crop rotations and input levels on weed communities in Ghana over 3 yr. Results showed that low inputs (absence of herbicide and fertilization) favored species richness, while higher input levels (weed control with herbicides and fertilizer use) reduced it. Diversity and evenness were also affected by inputs, with varying patterns across locations and seasons. Weed population growth rates (λ) varied significantly by location and treatment; all management programs resulted in increasing weed populations. Principal component analysis revealed distinct associations between weed species and crop management. The majority of weed species exhibited a generalist behavior and did not associate with a particular management. However, billygoat weed (Ageratum conyzoides L.) and Benghal dayflower (Commelina benghalensis L.) were positively associated with high-input systems, while purple nutsedge (Cyperus rotundus L.) exhibited strong associations with low and medium inputs. The weed–crop rotation dynamics described here demonstrate how management drives the selection of weed species that are more pervasive and interfere with important food crops in Ghanaian agriculture.

Cover crops are increasingly being included in crop rotations as a mechanism to promote diversity and provide agroecosystem services, including weed suppression. Recently, cover crop mixtures have increased in popularity in an attempt to provide a greater diversity in ecological services as compared with monocultures. Several recent studies, however, have failed to detect a positive effect of cover crop diversity on biomass production or weed suppression. Here we assessed biomass productivity and weed suppression in 19 cover crops seeded as monocultures and 19 mixtures of varying species composition and functional richness (two- and three-species mixtures) of full-season cover crops in Atlantic Canada. Cover crop biomass production and weed suppression varied by species identity, functional diversity, and species richness. As cover crop biomass increased regardless of diversity, weed biomass declined. Highly productive forbs and grasses provided the greatest weed suppression in monoculture. In line with previous observations, mixtures were not more productive or weed suppressive on average than the most productive monocultures. We observed that the inclusion of the highly productive species buckwheat (Fagopyrum esculentum Moench) and sorghum–sudangrass [Sorghum × drummondi (Nees ex Steud.) Millsp. & Chase] in a mixture increased stand evenness, productivity, weed suppression, and spatiotemporal stability. Taken together, our results suggest that effects of diversity on mixture productivity and weed suppression are species specific. This further demonstrates the importance of species selection in cover crop mixture design.

The Upper Gunnison Basin (UGB), Colorado, is a montane region characterized by unusual physiography and topographic isolation. Excavations of three caves in the UGB provide one of the most diverse records of high-elevation late Quaternary vertebrates in North America. The localities, Haystack Cave (2450 m above sea level [m asl]), Cement Creek Cave (2860 m asl), and Signature Cave (3055 m asl), together provide a near-continuous record of vertebrate communities that extends from before the last glacial maximum to the present. These communities largely represent a sagebrush (Artemisia spp.) steppe-tundra environment that prevailed throughout the UGB in the late Pleistocene. At least five taxa of extinct large mammals disappear from the UGB by the Early Holocene; one small mammal (the short-faced skunk Brachyprotoma cf. B. brevimala) also became extinct. The fossil record further indicates that only four small extant mammals (Sorex preblei, Dicrostonyx sp., Lemmiscus curtatus, and Urocitellus elegans) were extirpated from the UGB by the Early Holocene, in part because of community restructuring and loss of open habitats with expansion of forests to higher elevations. An analysis of taxonomic richness and evenness at Cement Creek Cave indicates high resilience in the small mammal community despite major climate shifts over the past 40,000+ yr.

Current theories on diversity–disease relationships describe host species diversity and species identity as important factors influencing disease risk, either diluting or amplifying disease prevalence in a community. Whereas the simple term ‘diversity’ embodies a set of animal community characteristics, it is not clear how different measures of species diversity are correlated with disease risk. We therefore tested the effects of species richness, Pielou's evenness and Shannon's diversity on bovine tuberculosis (bTB) risk in cattle in the Afar Region and Awash National Park between November 2013 and April 2015. We also analysed the identity effect of a particular species and the effect of host habitat use overlap on bTB risk. We used the comparative intradermal tuberculin test to assess the number of bTB-infected cattle. Our results suggested a dilution effect through species evenness. We found that the identity effect of greater kudu – a maintenance host – confounded the dilution effect of species diversity on bTB risk. bTB infection was positively correlated with habitat use overlap between greater kudu and cattle. Different diversity indices have to be considered together for assessing diversity–disease relationships, for understanding the underlying causal mechanisms. We posit that unpacking diversity metrics is also relevant for formulating disease control strategies to manage cattle in ecosystems characterized by seasonally limited resources and intense wildlife–livestock interactions.

The expansion of populations of invasive species continues to compromise the ecological and economic integrity of our natural resources. The negative effects of invasive species on native biota are widely reported. However, less is known about how the duration (i.e., age of oldest invaders) and intensity (i.e., density and percent cover) of an invasion influences native plant diversity and abundance at the microsite scale. We examined the influence of density, percent cover, and age of Amur honeysuckle (a nonnative invasive shrub), and several environmental factors on native plant taxa at 12 mixed hardwood forests in Indiana, USA. Overall, study sites with the greatest taxonomic diversity (Shannon's Diversity; H′), richness (S), percent cover, and density of native vegetation also had the lowest percent cover of Amur honeysuckle in the upper vertical stratum (1.01 to 5 m). Based on linear mixed model analyses, percent cover of Amur honeysuckle in the upper vertical stratum was consistently and negatively correlated with H′, S, total percent cover, and woody seedling density of native taxa at the microsite scale (P < 0.05). Duration of Amur honeysuckle at the microsite scale was not significant when percent cover of Amur honeysuckle in the upper vertical stratum was included in models. However, duration of Amur honeysuckle invasion was significantly correlated with dependent variables and with upper-stratum honeysuckle cover, suggesting that older Amur honeysuckle in a microsite resulted in greater light competition from above for native understory plant species. Beyond increased cover and shading, our results do not provide evidence of duration-related effects from long-term dominance of honeysuckle in our sampled mixed hardwood forest sites.

Knowledge about how the type, timing, and arrangement of cultural practices influence weed species composition is important for understanding the ecological results of control strategies and designing alternative crop management systems. We evaluated weed seed density, diversity, and community composition from 1997 to 1999 in a 35-yr-old study comparing cropping sequences (continuous corn, corn–soybean, corn–oat–hay) and tillage systems (conventional, minimum, and no-tillage) in Wooster, OH. Weed seedbank diversity, as measured by species richness (S), evenness (J), and the Shannon–Weiner index (H′), was influenced by crop diversity; mean values for each of the indices were generally higher for all combinations of the three-crop sequence than for the corn monoculture or the corn–soybean rotation. Except for 1998, mean seed density (to a depth of 10 cm) was higher in continuous corn than in corn and soybean rotations Species richness and seed density were also affected by tillage. Mean values for and mean germinable seeds were greatest in the no-tillage system, where the soil was disturbed only by the coulter units of the planter. Differences in weed seedbank community composition among tillage and rotation treatments were examined using two multivariate analyses. Using a multiresponse permutation procedure and canonical discriminant analysis, results suggest that the weed seed community in a corn–oat–hay rotational system differs in structure and composition from communities associated with continuous corn and corn–soybean systems. Additionally, germinable weed seed communities in no-tillage differed in composition from those in conventional and minimum tillage. Crop sequence and tillage system influenced weed species density and diversity and therefore community structure. Manipulation of these factors could help reduce the negative impact of weeds on crop production.

The sources of food and the width and overlap of the food niches of Bombus atratus and Bombus morio were determined by field observations and analysis of the pollen loads carried to the colonies by worker bees. The two species together utilized 50 flower species of which 26 were used by both. Solatium paniculatum (Solanaceae) and Psidium guajava (Myrtaceae) were the most frequently visited plants.

The food niche width and niche evenness for both species were similar. The correlation between niche width and niche evenness was non-significant showing that evenness does not depend on niche width. In addition, there was no correlation between niche width and overlap, i.e. overlap varied independently of niche width. A high overlap of food sources utilized by the two species was observed in September, October and November. This may be explained in one of two ways: (a) if B. atratus and B. morio compete for resources, competition would be more intense during those three months; (b) the convergency of both species to the same plant species (Solatium paniculatum and Psidium guajava) would only result in more intensive competition if resources were limiting. However, at that period of the year resources are abundant, therefore although the values of overlap were high, competition need not have occurred.

Diversity is one of the most frequently used attributes of ecological communities, and there is a long-standing discussion about their adequate use, calculus and interpretation. One of the most conspicuous and simple diversity estimators is species richness, but it has been criticized by recurrent pitfalls, which has biased comparisons and the testing of hypotheses. Otherwise, synthetic ecological indices of diversity are difficult to interpret due to the underlying complex or cryptic concepts. Most of the studies in soft-bottom macroinvertebrate communities trying to estimate species richness, have actually quantified species diversity as species density; the number of species per unit area. In the present study, the diversity of a tropical Pacific soft bottom community is analytically decomposed using two null models to assess species richness and evenness, and the slope of species–area curves to estimate species density. A declining trend of species richness was observed along a 2-year period and could be related to the cumulative effects of interannual environmental variability and fishing disturbance. The species–area relationship could be considered a good indicator of spatial heterogeneity, specifically to illustrate the depth gradient. Local abundance was negatively correlated with evenness, showing that high-density communities are the result of increases in abundance of a few dominant species. Here we demonstrate that seasonality, depth and abundance could explain diversity in soft-bottom macroinvertebrate communities of coastal waters and propose a robust procedure to survey diversity as a part of monitoring programmes of coastal management.