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mRNA localization signals can enhance the intracellular effectiveness of hammerhead ribozymes

Published online by Cambridge University Press:  01 September 1999

NAN SOOK LEE
Affiliation:
Department of Molecular Biology, Beckman Research Institute of the City of Hope, Duarte, California 91010-3011, USA
EDOUARD BERTRAND
Affiliation:
J. Monod, Tour 43, 2 Place Jussieu, 75251 Paris, France
JOHN ROSSI
Affiliation:
Department of Molecular Biology, Beckman Research Institute of the City of Hope, Duarte, California 91010-3011, USA Graduate School of Biological Sciences, City of Hope and Beckman Research Institute of the City of Hope, Duarte, California 91010-3011, USA
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Abstract

Subcellular localization signals for several mRNAs are positioned in their 3′ untranslated regions (UTR). We have utilized the human α- and β-actin 3′ UTRs as signals for colocalizing hammerhead ribozymes with a lacZ target mRNA. Ribozyme and target genes containing matched or unmatched 3′ UTRs were cotransfected into 12-day-old chicken embryonic myoblast and fibroblast (CEMF) cultures and assayed by in situ hybridization (ISH) using a dual label, antibody sandwich procedure, and dual fluorescence microscopy to monitor intracellular colocalization. β-galactosidase localization in transfectants was visualized by incubation with X-gal and also quantitated by an o-nitrophenyl β-D-galactopyranoside (ONPG) assay. We found that the percentage of colocalization using the matched α- or β-actin 3′ UTR (α–α or β–β) was enhanced approximately threefold relative to unmatched 3′ UTRs. The increase in ribozyme-mediated inhibition of β-galactosidase activity observed when matched 3′ UTRs were used was consistent with the observed percentage of colocalization. These results represent the first direct demonstration that mRNA localization signals (zipcodes) can be utilized to enhance intracellular ribozyme efficacy.

Type
Research Article
Information
RNA , Volume 5 , Issue 9 , September 1999 , pp. 1200 - 1209
Copyright
© 1999 RNA Society

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