Hostname: page-component-77c89778f8-gq7q9 Total loading time: 0 Render date: 2024-07-20T13:05:06.206Z Has data issue: false hasContentIssue false
  • English
  • Français

Assessment of milk quality based on bovine BAF60c gene mutation

Published online by Cambridge University Press:  15 August 2018

J. Liao Open the ORCID record for J. Liao [Opens in a new window] ,
T. Ku ,
Y. F. Liu  and
J. Zhao
J. Liao
Affiliation:
College of Food Engineering and Nutritional Science, Shaanxi Normal University, Xi'an, Shaanxi 710119, China
T. Ku
Affiliation:
College of Food Engineering and Nutritional Science, Shaanxi Normal University, Xi'an, Shaanxi 710119, China
Y. F. Liu*
Affiliation:
College of Food Engineering and Nutritional Science, Shaanxi Normal University, Xi'an, Shaanxi 710119, China
J. Zhao
Affiliation:
College of Food Engineering and Nutritional Science, Shaanxi Normal University, Xi'an, Shaanxi 710119, China
*
Author for correspondence: Y. F. Liu, E-mail: Yongfeng200@126.com
Get access Rights & Permissions [Opens in a new window]

Abstract

Monitoring milk quality traits and the classification of raw milk are important steps for generating high-quality dairy products. Given the important roles of the BRG1/BRM-associated factor 60c (BAF60c) gene in the regulation of physiological growth and production, the objective of the current study was to analyse the association between the BAF60c gene and milk quality and establish a gene-based method for pre-evaluating raw milk quality. For this purpose, DNA was isolated from 507 milk samples and genotyped using the polymerase chain reaction-restricted fragment length polymorphism method. Milk quality traits including milk protein percentage (MPP), milk fat percentage (MFP), lactose percentage (LP) and total solids content (TSC) were also evaluated from the same 507 milk samples. The newly found 6060 T > C mutation of the BAF60c gene was associated significantly with MPP and LP, but not with MFP and TSC. The results demonstrated that this mutation could be used for the pre-evaluation of MPP and LP; therefore, raw milk could be graded according to different genotypes.

Keywords

BAF60cbovine genomic DNAmilk qualitymutation
Type
Animal Research Paper
Information
The Journal of Agricultural Science , Volume 156 , Issue 4 , May 2018 , pp. 570 - 574
Copyright
Copyright © Cambridge University Press 2018 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Albini, S, Coutinho, P, Malecova, B, Giordani, L, Savchenko, A, Forcales, SV and Puri, PL (2013) Epigenetic reprogramming of human embryonic stem cells into skeletal muscle cells and generation of contractile myospheres. Cell Reports 3, 661–670.Google Scholar
Berkes, CA, Bergstrom, DA, Penn, BH, Seaver, KJ, Knoepfler, PS and Tapscott, SJ (2004) Pbx marks genes for activation by MyoD indicating a role for a homeodomain protein in establishing myogenic potential. Molecular Cell 14, 465–477.Google Scholar
Bonfatti, V, Di Martino, G and Carnier, P (2011) Effectiveness of mid-infrared spectroscopy for the prediction of detailed protein composition and contents of protein genetic variants of individual milk of Simmental cows. Journal of Dairy Science 94, 5776–5785.Google Scholar
Borodina, TA, Lehrach, H and Soldatov, AV (2003) DNA purification on homemade silica spin-columns. Analytical Biochemistry 321, 135–137.Google Scholar
Bowman, JC (1974) An Introduction to Animal Breeding. London, UK: Edward Arnold Ltd.Google Scholar
Caroli, AM, Chessa, S and Erhardt, GJ (2009) Invited review: milk protein polymorphisms in cattle: effect on animal breeding and human nutrition. Journal of Dairy Science 92, 5335–5352.Google Scholar
Debril, MB, Gelman, L, Fayard, E, Annicotte, JS, Rocchi, S and Auwerx, J (2004) Transcription factors and nuclear receptors interact with the swi/snf complex through the baf60c subunit. Journal of Biological Chemistry 279, 16677–16686.Google Scholar
De Marchi, M, Penasa, M, Cecchinato, A, Mele, M, Secchiari, P and Bittante, G (2011) Effectiveness of mid-infrared spectroscopy to predict fatty acid composition of Brown Swiss bovine milk. Animal 5, 1653–1658.Google Scholar
Etzion, Y, Linker, R, Cogan, U and Shmulevich, I (2004) Determination of protein concentration in raw milk by mid-infrared Fourier transform infrared/attenuated total reflectance spectroscopy. Journal of Dairy Science 87, 2779–2788.Google Scholar
Favus, MJ and Angeid-Backman, ELIN (1984) Effects of lactose on calcium absorption and secretion by rat ileum. American Journal of Physiology: Gastrointestinal and Liver Physiology 246, G281–G285.Google Scholar
Ferrand, M, Huquet, B, Barbey, S, Barillet, F, Faucon, F, Larroque, H, Leray, O, Trommenschlager, JM and Brochard, M (2011) Determination of fatty acid profile in cow's milk using mid-infrared spectrometry: interest of applying a variable selection by genetic algorithms before a PLS regression. Chemometrics and Intelligent Laboratory Systems 106, 183–189.Google Scholar
Flajollet, S, Lefebvre, B, Cudejko, C, Staels, B and Lefebvre, P (2007) The core component of the mammalian SWI/SNF complex SMARCD3/BAF60c is a coactivator for the nuclear retinoic acid receptor. Molecular and Cellular Endocrinology 270, 23–32.Google Scholar
Haug, A, Høstmark, AT and Harstad, OM (2007) Bovine milk in human nutrition – a review. Lipids in Health and Disease 6, 25.Google Scholar
Houle, D, Govindaraju, DR and Omholt, S (2010) Phenomics: the next challenge. Nature Reviews Genetics 11, 855–866.Google Scholar
Kulig, H, Kmieć, M, Kowalewska-Luczak, I and Andziak, G (2014) Effect of leptin gene polymorphisms on milk production traits of Jersey cows. Turkish Journal of Veterinary and Animal Sciences 33, 143–146.Google Scholar
Lickert, H, Takeuchi, JK, von Both, I, Walls, JR, McAuliffe, F, Adamson, SL, Henkelman, RM, Wrana, JL, Rossant, J and Bruneau, BG (2004) Baf60c is essential for function of BAF chromatin remodelling complexes in heart development. Nature 432, 107–112.Google Scholar
Liu, Y, Zan, L, Li, L and Xin, Y (2013 a) Proopiomelanocortin gene polymorphisms and its association with meat quality traits by ultrasound measurement in Chinese cattle. Gene 529, 138–143.Google Scholar
Liu, Y, Zan, L, Xin, Y, Tian, W, Li, L and Wang, H (2013 b) ZBTB38 gene polymorphism associated with body measurement traits in native Chinese cattle breeds. Gene 513, 272–277.Google Scholar
Liu, YF, Gao, JL, Yang, YF, Ku, T and Zan, LS (2014) Novel extraction method of genomic DNA suitable for long-fragment amplification from small amounts of milk. Journal of Dairy Science 97, 6804–6809.Google Scholar
Luginbühl, W (2002) Evaluation of designed calibration samples for casein calibration in Fourier transform infrared analysis of milk. LWT – Food Science and Technology 35, 554–558.Google Scholar
Mateescu, RG, Zhang, Z, Tsai, K, Phavaphutanon, J, Burton-Wurster, NI, Lust, G, Quaas, R, Murphy, K, Acland, GM and Todhunter, RJ (2005) Analysis of allele fidelity, polymorphic information content, and density of microsatellites in a genome-wide screening for hip dysplasia in a crossbreed pedigree. Journal of Heredity 96, 847–853.Google Scholar
Meng, ZX, Li, S, Wang, L, Ko, HJ, Lee, Y, Jung, DY, Okutsu, M, Yan, Z, Kim, JK and Lin, JD (2013) Baf60c drives glycolytic metabolism in the muscle and improves systemic glucose homeostasis through Deptor-mediated Akt activation. Nature Medicine 19, 640–645.Google Scholar
Nakamura, R, Koshiba-Takeuchi, K, Tsuchiya, M, Kojima, M, Miyazawa, A, Ito, K, Ogawa, H and Takeuchi, JK (2016) Expression analysis of Baf60c during heart regeneration in axolotls and neonatal mice. Development, Growth & Differentiation 58, 367–382.Google Scholar
Ng-Kwai-Hang, KF, Hayes, JF, Moxley, JE and Monardes, HG (1982) Environmental influences on protein content and composition of bovine milk. Journal of Dairy Science 65, 1993–1998.Google Scholar
Puri, PL and Mercola, M (2012) BAF60 a, B, and Cs of muscle determination and renewal. Genes & Development 26, 2673–2683.Google Scholar
Rhone, JA, Koonawootrittriron, S and Elzo, MA (2008) Record keeping, genetic selection, educational experience and farm management effects on average milk yield per cow, milk fat percentage, bacterial score and bulk tank somatic cell count of dairy farms in the Central region of Thailand. Tropical Animal Health and Production 40, 627–636.Google Scholar
Rutten, MJM, Bovenhuis, H, Hettinga, KA, van Valenberg, HJF and van Arendonk, JAM (2009) Predicting bovine milk fat composition using infrared spectroscopy based on milk samples collected in winter and summer. Journal of Dairy Science 92, 6202–6209.Google Scholar
Selvaggi, M, Dario, C, Normanno, G, Celano, GV and Dario, M (2009) Genetic polymorphism of STAT5A protein: relationships with production traits and milk composition in Italian Brown cattle. Journal of Dairy Research 76, 441–445.Google Scholar
Shete, S, Tiwari, H and Elston, RC (2000) On estimating the heterozygosity and polymorphism information content value. Theoretical Population Biology 57, 265–271.Google Scholar
Sørensen, LK, Lund, M and Juul, B (2003) Accuracy of Fourier transform infrared spectrometry in determination of casein in dairy cows’ milk. Journal of Dairy Research 70, 445–452.Google Scholar
Soyeurt, H, Dardenne, P, Dehareng, F, Lognay, G, Veselko, D, Marlier, M, Bertozzi, C, Mayeres, P and Gengler, N (2006) Estimating fatty acid content in cow milk using mid-infrared spectrometry. Journal of Dairy Science 89, 3690–3695.Google Scholar
Sun, D, Jia, J, Ma, Y, Zhang, Y, Wang, Y, Yu, Y and Zhang, Y (2009) Effects of DGAT1 and GHR on milk yield and milk composition in the Chinese dairy population. Animal Genetics 40, 997–1000.Google Scholar
Tian, XC, Kubota, C, Sakashita, K, Izaike, Y, Okano, R, Tabara, N, Curchoe, C, Jacob, L, Zhang, Y, Smith, S, Bormann, C, Xu, J, Sato, M, Andrew, S and Yang, X (2005) Meat and milk compositions of bovine clones. Proceedings of the National Academy of Sciences of the USA 102, 6261–6266.Google Scholar
Wang, Y, Wong, RH, Tang, T, Hudak, CS, Yang, D, Duncan, RE and Sul, HS (2013) Phosphorylation and recruitment of BAF60c in chromatin remodeling for lipogenesis in response to insulin. Molecular Cell 49, 283–297.Google Scholar
Wenzl, P, Carling, J, Kudrna, D, Jaccoud, D, Huttner, E, Kleinhofs, A and Kilian, A (2004) Diversity Arrays Technology (DArT) for whole-genome profiling of barley. Proceedings of the National Academy of Sciences of the USA 101, 9915–9920.Google Scholar