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Molecular cloning, characterization, and expression analysis of a novel sema-2a homologue in Polyrhachis vicina (Hymenoptera: Formicidae)

Published online by Cambridge University Press:  02 April 2012

Jing Luo
Affiliation:
College of Life Sciences, Shaanxi Normal University, Xi'an, 710062, People's Republic of China
Geng-Si Xi*
Affiliation:
College of Life Sciences, Shaanxi Normal University, Xi'an, 710062, People's Republic of China
Shu-Min Lü
Affiliation:
College of Plant Protection, Northwest A&F University, Yangling, 712100, People's Republic of China
Ke Li
Affiliation:
College of Life Sciences, Shaanxi Normal University, Xi'an, 710062 and Linfen, 041004, People's Republic of China
Qing Li
Affiliation:
College of Life Sciences, Shaanxi Normal University, Xi'an, 710062, People's Republic of China
*
1 Corresponding author (e-mail: xigengsi@snnu.edu.cn).

Abstract

The semaphorin gene family plays important roles in axonal guidance in vertebrates and invertebrates. Semaphorin 2a, a member of the semaphorin family, belongs to class 2, which is found only in invertebrates. In our study, semaphorin 2a was cloned from the ant Polyrhachis vicina Roger. The full length of P. vicina semaphorin 2a (Pv-sema-2a) is 2763 base pairs (bp) and it contains a 5′-untranslated region (UTR) 92 bp long and a 3′-UTR 521 bp long. The open reading frame of Pv-sema-2a encodes a 716-amino-acid protein with a predicted molecular mass of 81.1 kilodaltons. Real-time quantitative reverse-transcription – polymerase chain reaction indicated that Pv-sema-2a mRNA is differentially expressed during P. vicina development, in the whole bodies as well as the heads of different castes. The high mRNA levels in embryos and pupae suggest that Pv-sema-2a plays an important role in ant development.

Résumé

La famille des gènes de la sémaphorine jouent des rôles importants dans le guidage des axones chez les vertébrés et les invertébrés. La sémaphorine 2a, un membre de la famille des sémaphorines, appartient à la classe 2 qui se retrouve seulement chez les invertébrés. Nous avons, dans notre étude, cloné la sémaphorine 2 chez la fourmi Polyrhachis vicina Roger. La longueur totale de la sémaphorine 2a (Pv-sema-2a) de P. vicina est de 2 763 paires de bases (bp) et contient une région 5′ non traduite (5′-UTR) de 92 bp et une autre 3′-UTR de 521 bp. Le cadre ouvert de lecture (ORF) de Pv-sema-2a code une protéine de 716 acides aminés avec une masse moléculaire prédite de 81,1 kilodaltons. La RT-PCR quantitative en temps réel indique que l'ARNm Pv-sem2a est exprimé différemment au cours du développement de P. vicina, tant dans les corps entiers que dans les têtes des différentes castes. Les concentrations élevées de ARNm chez les embryons et les nymphes indiquent le rôle important de Pv-sema-2a dans le développement des fourmis.

[Traduit par la Rédaction]

Type
Articles
Copyright
Copyright © Entomological Society of Canada 2010

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References

Bendtsen, J.D., Nielsen, H., von Heijine, G., and Brunak, S. 2004. Improved prediction of signal peptides: SignalP 3.0. Journal of Biochemistry and Molecular Biology, 340: 783795.Google Scholar
Bloch, G., Simon, T., Robinson, G.E., and Hefetz, A. 2000. Brain biogenic amines and reproductive dominance in bumble bees (Bombus terrestris). Journal of Comparative Physiology A: Sensory, Neural, and Behavioral Physiology, 186: 261268. PMID:10757241 doi:10.1007/s003590050426.Google Scholar
Fitzgerald, M., and Shenk, T. 1981. The sequence 5′-AAUAAA-3′ forms parts of the recognition site for polyadenylation of late SV40 mRNAs. Cell, 24: 251260. PMID:6113054 doi:10.1016/0092-8674(81)90521-3.CrossRefGoogle ScholarPubMed
Isbister, C.M., Tsai, A., Wong, S.T., Kolodkin, A., and O'Connor, T.P. 1999. Discrete roles for secreted and transmembrane semaphorins in neuronal growth cone guidance in vivo. Development, 126: 20072019. PMID:10101134.CrossRefGoogle ScholarPubMed
Ishii, Y., Kubota, K., and Hara, K. 2005. Postembryonic development of the mushroom bodies in the ant, Camponotus japonicus. Zoological Science, 22: 743753.CrossRefGoogle ScholarPubMed
Jeanmougin, F., Thompson, J.D., Gouy, M., Higgins, D.G., and Gibson, T.J. 1998. Multiple sequence alignment with Clustal X. Trends in Biochemical Sciences, 23: 403405. PMID: 9810230 doi:10.1016/S0968-0004(98)01285-7.CrossRefGoogle ScholarPubMed
Kaplan, J., Manuck, S.B., Fontenot, M.B., and Mann, J.J. 2002. Central nervous system monoamine correlates of social dominance in cynomolgus monkeys (Macaca fascicularis). Neuropsychopharmacology, 26: 431443 PMID: 11927168 doi:10.1016/S0893-133X(01)00344-X.CrossRefGoogle ScholarPubMed
Kolodkin, A.L., Matthes, D.J., and Goodman, C.S. 1993. The semaphoring genes encode a family of transmembrane and secreted growth cone guidance molecules. Cell, 75: 13891399. PMID: 8269517 doi:10.1016/0092-8674(93)90625-Z.CrossRefGoogle Scholar
, S., Xi, G., and Wang, X. 2008. Molecular cloning, characterization, and expression analysis of a QM homologue in the ant Polyrhachis vicina (Hymenoptera: Formicidae). The Canadian Entomologist, 140: 312323. doi:10.4039/N08-009.CrossRefGoogle Scholar
Matthes, D.J., Sink, H., Kolodkin, A.L., and Goodman, C.S. 1995. Semaphorin II can function as a selective inhibitor of specific synaptic arborizations. Cell, 81: 631639. PMID:7758117 doi:10.1016/0092-8674(95)90084-5.CrossRefGoogle ScholarPubMed
Maynard, K.R., McCarthy, S.S., Sheldon, E., and Horch, H.W. 2007. Developmental and adult expression of semaphorin 2a in the cricket Gryllus bimaculatus. The Journal of Comparative Neurology, 503: 169181. PMID:17480023 doi:10.1002/cne.21392.Google Scholar
Nemoto, M., and Hara, K. 2007. Ecdysone recepto expression in developing and adult mushroom bodies of the ant Camponotus japonicus. Development Genes and Evolution, 217: 619627 PMID:17703321 doi:10.1007/s00427-007-0172-1.CrossRefGoogle Scholar
Rose, T.M., Schultz, E.R., Henikoff, J.G., Pietrokovski, S., McCallum, C.M., and Henikoff, S. 1998. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Research, 26: 16281635. PMID:9512532 doi:10.1093/nar/26.7.1628.Google Scholar
Roy, P., Zheng, H., Warren, C., and Culotti, J. 2000. mab-20 encodes Semaphorin-2a and is required to prevent ectopic cell contacts during epidermal morphogenesis in Caenorhabditis elegans. Development (Cambridge), 127: 755767. PMID:10648234.CrossRefGoogle ScholarPubMed
Semaphorin Nomenclature Committee. 1999. Unified nomenclature for the semaphorins/collapsins. Cell, 97: 551552.Google Scholar
SPSS Inc. 2004. SPSS. Version 13.0. SPSS Inc., Chicago.Google Scholar
Tamura, K., Dudley, J., Nei, M., and Kumar, S. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software. Version 4.0. Molecular Biology and Evolution, 24: 15961599. PMID:17488738 doi:10.1093/molbev/msm092.CrossRefGoogle ScholarPubMed
Yazdani, U., and Terman, J.R. 2006. The semaphorins. Genome Biology, 7: 211. PMID: 16584533 doi:10.1186/gb-2006-7-3-211.Google Scholar
Zhang, C.Y., Xu, S.G., and Huang, X.X. 2005. A novel and convenient relative quantitative method of fluorescence real time RT-PCR assay based on slope of standard curve. Progress in Biochemistry and Biophysiology, 32: 883888.Google Scholar