Histone RNA 3′ processing in vitro produces
one or more 5′ cleavage products corresponding to
the mature histone mRNA 3′ end, and a group of 3′
cleavage products whose 5′ ends are mostly located
several nucleotides downstream of the mRNA 3′ end.
The formation of these 3′ products is coupled to
the formation of 5′ products and dependent on the
U7 snRNP and a heat-labile processing factor. These short
3′ products therefore are a true and general feature
of the processing reaction. Identical 3′ products
are also formed from a model RNA containing all spacer
nucleotides downstream of the mature mRNA 3′ end,
but no sequences from the mature mRNA. Again, this reaction
is dependent on both the U7 snRNP and a heat-labile factor.
Unlike the processing with a full-length histone pre-mRNA,
this reaction produces only 3′ but no 5′ fragments.
In addition, product formation is inhibited by addition
of cap structures at the model RNA 5′ end, indicating
that product formation occurs by 5′-3′ exonucleolytic
degradation. This degradation of a model 3′ product
by a 5′-3′ exonuclease suggests a mechanism
for the release of the U7 snRNP after processing by shortening
the cut-off histone spacer sequences base paired to U7
RNA.