Atmospheric pressure plasma jet (APPJ) was developed for decontamination purposes. Features of the device are ability to work with various feed-gases at the atmospheric pressure in several gas-flow, frequency and current-voltage regimes. LabVIEW virtual measurement sub-system for monitoring and measurement process through subsequent setting of electrical and gas-flow parameters (digital control of flow-meters), conditioning and amplification of electrical signals and collection of the data from peripheral measuring devices was applied.