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Protein disulphide isomerase family in bread wheat (Triticum aestivum L.): protein structure and expression analysis

Published online by Cambridge University Press:  04 May 2011

A. R. Paolacci
Affiliation:
Dipartimento di Agrobiologia e Agrochimica, Università della Tuscia, Viterbo, Italy
M. Ciaffi*
Affiliation:
Dipartimento di Agrobiologia e Agrochimica, Università della Tuscia, Viterbo, Italy
A. P. Dhanapal
Affiliation:
Scuola Superiore Sant'Anna, Pisa, Italy
O. A. Tanzarella
Affiliation:
Dipartimento di Agrobiologia e Agrochimica, Università della Tuscia, Viterbo, Italy
E. Porceddu
Affiliation:
Dipartimento di Agrobiologia e Agrochimica, Università della Tuscia, Viterbo, Italy
E. d'Aloisio
Affiliation:
Scuola Superiore Sant'Anna, Pisa, Italy
*
*Corresponding author. E-mail: ciaffi@unitus.it

Abstract

The deduced amino-acid sequences of 17 protein disulphide isomerase (PDI) and PDI-like cDNAs of wheat assigned to nine homoeologous groups were searched for conserved motives by comparison with characterized sequences in different protein databases. The wheat protein sequences encoded by genes of different homoelogous groups showed a high level of structural similarity with the corresponding protein sequences of other species clustering into the same phylogenetic group. The proteins of five groups (I–V) share two thioredoxin-like active domains and show structural similarities with the corresponding proteins of higher eukaryotes, whereas those of the remaining three groups (VI–VIII) contain a single thioredoxin-like active domain. The expression analysis of the nine non-homoeologous wheat genes, which was carried out by quantitative RT-PCR in developing caryopses and in seedlings subjected to temperature stresses, showed their constitutive although highly variable transcription rate. The comprehensive structural and transcriptional characterization of the PDI and PDI-like genes of wheat performed in this study represents a basis for future functional characterization of the PDI gene family in the hexaploid context of bread wheat.

Type
Research Article
Copyright
Copyright © NIAB 2011

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References

Breuza, L, Halbeisen, R, Jeno, P, Otte, S, Barlowe, C, Hong, W and Hauri, HP (2004) Proteomics of endoplasmic reticulum–Golgi intermediate compartment (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies ERGIC-32, a new cycling protein that interacts with human Erv46. The Journal of Biological Chemistry 279: 4724247253.CrossRefGoogle ScholarPubMed
Ciaffi, M, Paolacci, AR, D'Aloisio, E, Tanzarella, OA and Porceddu, E (2006) Cloning and characterization of wheat PDI (protein disulfide isomerase) homoeologous genes and promoter sequences. Gene 366: 209218.CrossRefGoogle ScholarPubMed
Clissold, PM and Bicknell, R (2003) The thioredoxin-like fold: hidden domains in protein disulfide isomerases and other chaperone proteins. Bioessays 25: 603611.CrossRefGoogle ScholarPubMed
Ellgaard, L and Ruddock, LW (2005) The human protein disulphide isomerase family: substrate interactions and functional properties. European Molecular Biology Organization Reports 6: 2832.Google ScholarPubMed
Houston, NL, Fan, C, Xiang, QY, Schulze, JM, Jung, R and Boston, RS (2005) Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins. Plant Physiology 137: 762778.CrossRefGoogle ScholarPubMed
Monnat, J, Neuhaus, EM, Pop, MS, Ferrari, DM, Kramer, B and Soldati, T (2000) Identification of a novel saturable endoplasmic reticulum localization mechanism mediated by the C-terminus of a Dictyostelium protein disulfide isomerase. Molecular Biology of the Cell 11: 34693484.CrossRefGoogle ScholarPubMed
Paolacci, AR, Tanzarella, OA, Porceddu, E and Ciaffi, M (2009) Identification and validation of reference genes for quantitative RT-PCR normalization in wheat. BMC Molecular Biology 10: 11.CrossRefGoogle ScholarPubMed
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