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Umbilicaria orientalis – a new species of Umbilicaria subg. Papillophora with an East Asian distribution: morphological delimitation and molecular evidence

Published online by Cambridge University Press:  11 November 2020

Evgeny A. Davydov*
Affiliation:
Altai State University – Herbarium (ALTB), Lenin Prosp. 61, Barnaul656049, Russian Federation
Lidia S. Yakovchenko
Affiliation:
Federal Scientific Center of the East Asia Terrestrial Biodiversity FEB RAS, Russian Academy of Sciences Far Eastern Branch, Vladivostok, Russian Federation
Irina Urbanavichene
Affiliation:
Komarov Botanical Institute RAS, Laboratory of Lichenology and Bryology, Prof. Popov Str. 2, St. Petersburg197376, Russian Federation
Liudmila Konoreva
Affiliation:
Komarov Botanical Institute RAS, Laboratory of Lichenology and Bryology, Prof. Popov Str. 2, St. Petersburg197376, Russian Federation Botanical Garden Institute FEB RAS, Vladivostok, Russian Federation Polar-Alpine Botanical Garden and Institute, Kirovsk184256, Russian Federation
Sergey Chesnokov
Affiliation:
Komarov Botanical Institute RAS, Laboratory of Lichenology and Bryology, Prof. Popov Str. 2, St. Petersburg197376, Russian Federation Botanical Garden Institute FEB RAS, Vladivostok, Russian Federation
Tatiana Kharpukhaeva
Affiliation:
Institute of General and Experimental Biology, Siberian Branch of the Russian Academy of Sciences, Sakhyanovoy Str. 6, Ulan-Ude, Russian Federation
Walter Obermayer
Affiliation:
Insitute of Biology, University of Graz, Universitätspl. 3, 8010Graz, Austria
*
Author for correspondence: Evgeny A. Davydov. E-mail: eadavydov@yandex.ru

Abstract

Umbilicaria orientalis Davydov sp. nov. is described and phylogenetic analysis (ITS, mtLSU and RPB2) confirmed its distinctness and indicated a sister relationship with U. trabeculata within the U. vellea group. The species is morphologically similar to U. vellea but differs by simple, cylindrical or strap-like rhizinomorphs and by thalloconidia, developing both on the lower surface and on rhizinomorphs, that are 1–2 (rarely 4)–celled or in aggregates of up to 5–6 cells. Umbilicaria orientalis is described from the Russian Far East and is currently known from a wide range of localities in East Asia, from the Far East to South Siberia and Mongolia in the north, to Hebei and Tibet in the south. New sequences of U. americana were obtained; the species represents an independent phylogenetic lineage within Umbilicaria subg. Papillophora. Diagnostic traits and variability of different developmental stages of U. orientalis, as well as its East Asian distribution pattern, are discussed.

Type
Standard Papers
Copyright
Copyright © The Author(s), 2020. Published by Cambridge University Press on behalf of the British Lichen Society

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References

Ahti, T and Brodo, IM (1981) Cladonia labradorica sp. nov., and C. kanewskii in Canada. Bryologist 84, 238241.CrossRefGoogle Scholar
Bardunov, LV (1990) The East-Asiatic species in the moss flora of the southern Siberia. Botanicheskii Zhurnal 75, 636643. (In Russian).Google Scholar
Bendiksby, M and Timdal, E (2013) Molecular phylogenetics and taxonomy of Hypocenomyce sensu lato (Ascomycota: Lecanoromycetes): extreme polyphyly and morphological/ecological convergence. Taxon 62, 940956.CrossRefGoogle Scholar
Byazrov, LG (1986) Additions to the lichen flora in Khangai (Mongolian Peoples Republic). 1. The family Umbilicariaceae Fee. Bjulleten' Moskovskogo Obscestva Ispytatalej Pirody. Otdel Biologiceskij 91, 100101. (In Russian).Google Scholar
Chesnokov, SV, Konoreva, LA and Andreev, MP (2017) New records of rare and protected species of lichens on Kodar Range (Kalarsky District, Trans-Baikal Territory). Turczaninowia 20(1), 8098. (In Russian).Google Scholar
Culberson, CF and Johnson, A (1982) Substitution of methyl tert.-butyl ether for diethyl ether in the standardized thin-layer chromatographic method for lichen products. Journal of Chromatography 238, 483487.CrossRefGoogle Scholar
Culberson, CF and Kristinsson, HD (1970) A standardized method for the identification of lichen products. Journal of Chromatography 46, 8593.CrossRefGoogle Scholar
Davydov, EA (2017) Family Umbilicariaceae. In Andreev, MP and Himelbrant, DE (eds), Lichen Flora of Russia: Genus Protoparmelia, families Coenogoniaceae, Gyalectaceae, and Umbilicariaceae. Moscow, St. Petersburg: KMK, pp. 66136.Google Scholar
Davydov, EA and Wei, JC (2009) Boreoplaca ultrafrigida (Umbilicariales), the correct name for Rhizoplacopsis weichingii. Mycotaxon 108, 301305.CrossRefGoogle Scholar
Davydov, EA and Yakovchenko, LS (2017) Rhizocarpon smaragdulum, a new monosporic yellow-thalline species and some additional species of the genus Rhizocarpon from the Altai Mountains (Siberia). Lichenologist 49, 457466.CrossRefGoogle Scholar
Davydov, EA, Himelbrant, DE and Stepanchikova, IS (2011 a) Contribution to the study of Umbilicariaceae (lichenized Ascomycota) in Russia. II. Kamchatka Peninsula. Herzogia 24, 229241.CrossRefGoogle Scholar
Davydov, EA, Tchabanenko, SI, Makryi, TV and Khanin, VA (2011 b) The second confirmed record of Umbilicaria pulvinaria (lichenized Ascomycota) since its original description in 1914. Turczaninowia 14(2), 119122.Google Scholar
Davydov, EA, Peršoh, D and Rambold, G (2017) Umbilicariaceae (lichenized Ascomycota) – trait evolution and a new generic concept. Taxon 66, 12821303.CrossRefGoogle Scholar
Davydov, EA, Blum, OB, Kashevarov, GP and Grakhov, VP (2019 a) Umbilicaria subpolyphylla Oxner: the correct name for U. iberica Sancho & Krzewicka and its bipolar distribution pattern. Lichenologist 51, 205220.CrossRefGoogle Scholar
Davydov, EA, Chesnokov, SV, Konoreva, LA and Andreev, MP (2019 b) Umbilicariaceae (lichenized Ascomycota) from the Stanovoye Nagor'e Highlands (South Siberia, Russia). Herzogia 32, 472484.10.13158/heia.32.2.2019.472CrossRefGoogle Scholar
Davydov, EA, Ahti, T and Sennikov, AN (2020) The nomenclatural history of Umbilicaria spodochroa and nomenclatural corrections in Umbilicariaceae. Mycotaxon 135, 131141.CrossRefGoogle Scholar
Edgar, RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32, 17921797.10.1093/nar/gkh340CrossRefGoogle ScholarPubMed
Elenkin, A (1904) Lichenes Florae Rossiae et regionum confinium orientalium. Fasciculus II–IV. Acta Horti Petropolitani 24, 1118.Google Scholar
Feuerer, T and Hawksworth, DL (2007) Biodiversity of lichens, including a world-wide analysis of checklist data based on Takhtajan's floristic regions. Biodiversity and Conservation 16, 8598.CrossRefGoogle Scholar
Feuerer, T and Höhne, H (2017) Takhtajan's definition of global floristic regions revisited. Graphis Scripta 29, 4043.Google Scholar
Golubkova, NS (1983) Analysis of Lichen Flora of Mongolia. Leningrad: Nauka.Google Scholar
Hasenhüttl, G and Poelt, J (1978) Über die Brutkörner bei der Flechtengattung Umbilicaria. Berichte der Deutschen Botanischen Gesellschaft 91, 275296.Google Scholar
Hestmark, G (1990) Thalloconidia in the genus Umbilicaria. Nordic Journal of Botany 9, 547574.CrossRefGoogle Scholar
Huneck, S, Porzel, A, Schmidt, J, Feige, GB and Posner, B (1993) Crustinic acid, a tridepside from Umbilicaria crustulosa. Phytochemistry 32, 475477.CrossRefGoogle Scholar
Kamelin, RV (2017) Flora of the Earth: Floristic Regions of the Land. St. Petersburg, Barnaul: Piat’ plus.Google Scholar
Kharpukhaeva, TM (2010) The Lichens of Dzherginskii State Nature Reserve. Ulan-Ude: BSC SB RAS Publishers.Google Scholar
Koponen, T and Ignatova, E (2018) Plagyomnium acutum (Lindb.) T. J. Kop. In Ignatov, MS (ed.), Mniaceae Schwagr. Moss Flora of Russia. Vol. 4. Bartramiales – Aulacomniales. Moscow: KMK, pp. 496497. (In Russian).Google Scholar
Lanfear, R, Calcott, B, Ho, SYW and Guindon, S (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution 29, 16951701.CrossRefGoogle ScholarPubMed
Larget, B and Shimon, D (1999) Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Molecular Biology and Evolution 16, 750759.CrossRefGoogle Scholar
Lishtva, AV (1998) Раrmеliа shinanoana (Parmeliaceae, Lichenes), а new species for Central Siberia. Botanicheskii Zhurnal 83, 133135. (In Russian).Google Scholar
Lishtva, AV, Himelbrant, DE and Stepanchikova, IS (2013) Parmelia asiatica (Parmeliaceae): the first record for the lichen flora of Russia. Novosti Sistematiki Nizshikh Rastenii [Novit. Syst. Pl. non Vasc.] 47, 225229. (In Russian).CrossRefGoogle Scholar
Liu, YJ, Whelen, S and Hall, BD (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Molecular Biology and Evolution 16, 17991808.CrossRefGoogle Scholar
McCune, B, Curtis, MJ and Meglio, JD (2017) New taxa and a case of ephemeral spore production in Lecideaceae from western North America. Bryologist 120, 115124.CrossRefGoogle Scholar
Moon, KH (2013) Lichen-forming and Lichenicolous Fungi of Korea. Incheon, South Korea: National Institute of Biological Resources.Google Scholar
Narui, T, Culberson, CF, Culberson, WL, Johnson, A and Shibata, S (1996) A contribution to the chemistry of the lichen family Umbilicariaceae (Ascomycotina). Bryologist 99, 199211.CrossRefGoogle Scholar
Nylander, W (1866) Lichenes Lapponiae orientalis. Notiser ur Sällskapets pro Fauna et Flora Fennica Förhandlingar 8, 101192.Google Scholar
Ohmura, Y and Kashiwadani, H (2018) Checklist of lichens and allied fungi of Japan. National Museum of Nature and Science Monographs 49, 1140.Google Scholar
Poelt, J (1977) Die Gattung Umbilicaria (Umbilicariaceae) (Flechten des Himalaya 14). Khumbu Himal, Ergebnisse des Forschungsunternehmens Nepal Himalaya 6, 397435.Google Scholar
Poelt, J and Nash, TH III (1993) Studies in the Umbilicaria vellea group (Umbilicariaceae) in North America. Bryologist 96, 422430.CrossRefGoogle Scholar
Posner, B, Feige, GB and Huneck, S (1992) Studies on the chemistry of the lichen genus Umbilicaria Hoffm. Zeitschrift für Naturforschung C 47, 19.CrossRefGoogle Scholar
Prieto, M and Wedin, M (2013) Dating the diversification of the major lineages of Ascomycota (Fungi). PLoS ONE 8, e65576.CrossRefGoogle Scholar
Printzen, C (2002) Fungal specific primers for PCR-amplification of mitochondrial LSU in lichens. Molecular Ecology Notes 2, 130132.CrossRefGoogle Scholar
Ronquist, R, Teslenko, M, van der Mark, P, Ayres, DL, Darling, A, Höhna, S, Larget, B, Liu, L, Suchard, MA and Huelsenbeck, JP (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61, 539542.10.1093/sysbio/sys029CrossRefGoogle ScholarPubMed
Satô, MM (1935) Studies on the lichen flora of Japan. VI. New or remarkable lichens from the herbarium of the late Prof. A. Yasuda. Journal of Japanese Botany 11, 314318.Google Scholar
Seriña, E, Arroyo, R, Manrique, E and Sancho, LG (1996) Lichen substances and their intraspecific variability within eleven Umbilicaria species in Spain. Bryologist 99, 335342.CrossRefGoogle Scholar
Silvestro, D and Michalak, I (2012) RaxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335337.CrossRefGoogle Scholar
Stamatakis, A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30, 13121313.CrossRefGoogle ScholarPubMed
Takhtajan, A (1986) Floristic Regions of the World. [Translated by Crovello, Theodore J. with the assistance and collaboration of the author and under the editorship of Arthur Cronquist]. Berkeley: University of California Press.Google Scholar
Urbanavichene, IN and Urbanavichus, GP (1999) New and rare for Asia and Russia lichens from the southern Baikal region. Botanicheskii Zhurnal 84, 129133.Google Scholar
Urbanavichene, IN and Urbanavichus, GP (2009) To the lichen flora of Oka Plateau (Eastern Sayan, Republic of Buryatia). Novosti Sistematiki Nizshikh Rastenii [Novit. Syst. Pl. non Vasc.] 43, 229260. (In Russian).CrossRefGoogle Scholar
Urbanavichus, GP (1997) Nemoral relicts of the lichen flora of the Baikal Nature Reserve. Botanicheskii Zhurnal 82, 8899. (In Russian).Google Scholar
Urbanavichus, GP (2011) Specific features of lichen diversity of Russia. Izvestiya RAN, Seriya geograficheskaya 1, 6678. (In Russian).Google Scholar
Wedin, M, Wiklund, E, Crewe, A, Döring, H, Ekman, S, Nyberg, Å, Schmitt, I and Lumbsch, HT (2005) Phylogenetic relationships of Lecanoromycetes (Ascomycota) as revealed by analyses of mtSSU and nLSU rDNA sequence data. Mycological Research 109, 159172.CrossRefGoogle ScholarPubMed
Wei, JC (1991) An Enumeration of Lichens in China. Beijing: International Academic Publishers.Google Scholar
Wei, JC and Jiang, YM (1993) The Asian Umbilicariaceae (Ascomycota). Mycosystema Monographicum Series No. 1. Beijing: International Academic Publishers.Google Scholar
Wei, JC, Jiang, YM and Guo, SY (1996) A new species of Umbilicaria. Mycosystema 8-9, 6570.Google Scholar
Wu, ZY and Wu, S (1996) A proposal for a new floristic kingdom (realm) – the East Asian Kingdom, its delineation and characteristics. In Zhang, AL and Wu, SG (eds), Floristic Characteristics and Diversity of East Asian Plants. Beijing: Higher Education Press, pp. 342.Google Scholar
Yakovchenko, LS, Davydov, EA, Paukov, AG and Ohmura, Y (2019) New records of lichens from the Russian Far East. I. Fuscidea submollis and other arctic-alpine species. Turczaninowia 22(3), 9196.Google Scholar
Zhou, QM and Wei, JC (2007) A new order Umbilicariales J. C. Wei & Q. M. Zhou (Ascomycota). Mycosystema 26, 4045.Google Scholar