Hostname: page-component-76fb5796d-45l2p Total loading time: 0 Render date: 2024-04-27T05:02:40.468Z Has data issue: false hasContentIssue false

Genetic evaluation and selection response for growth in meat-type quail through random regression models using B-spline functions and Legendre polynomials

Published online by Cambridge University Press:  14 August 2017

L. F. M. Mota
Affiliation:
Department of Animal Science, Faculty of Agricultural and Veterinary Science, State University of São Paulo, Jaboticabal, SP 14884-900, Brazil
P. G. M. A. Martins*
Affiliation:
Federal Institute of Northern Minas Gerais, Almenara, MG 39900-000, Brazil
T. O. Littiere
Affiliation:
Department of Animal Sciences, Federal University of Jequitinhonha and Mucuri Valleys, Diamantina, MG 39100-000, Brazil
L. R. A. Abreu
Affiliation:
School of Veterinary, Federal University of Minas Gerais, Belo Horizonte, MG 30123-970, Brazil
M. A. Silva
Affiliation:
Department of Animal Sciences, Federal University of Jequitinhonha and Mucuri Valleys, Diamantina, MG 39100-000, Brazil
C. M. Bonafé
Affiliation:
Department of Animal Sciences, Federal University of Jequitinhonha and Mucuri Valleys, Diamantina, MG 39100-000, Brazil
Get access

Abstract

The objective was to estimate (co)variance functions using random regression models (RRM) with Legendre polynomials, B-spline function and multi-trait models aimed at evaluating genetic parameters of growth traits in meat-type quail. A database containing the complete pedigree information of 7000 meat-type quail was utilized. The models included the fixed effects of contemporary group and generation. Direct additive genetic and permanent environmental effects, considered as random, were modeled using B-spline functions considering quadratic and cubic polynomials for each individual segment, and Legendre polynomials for age. Residual variances were grouped in four age classes. Direct additive genetic and permanent environmental effects were modeled using 2 to 4 segments and were modeled by Legendre polynomial with orders of fit ranging from 2 to 4. The model with quadratic B-spline adjustment, using four segments for direct additive genetic and permanent environmental effects, was the most appropriate and parsimonious to describe the covariance structure of the data. The RRM using Legendre polynomials presented an underestimation of the residual variance. Lesser heritability estimates were observed for multi-trait models in comparison with RRM for the evaluated ages. In general, the genetic correlations between measures of BW from hatching to 35 days of age decreased as the range between the evaluated ages increased. Genetic trend for BW was positive and significant along the selection generations. The genetic response to selection for BW in the evaluated ages presented greater values for RRM compared with multi-trait models. In summary, RRM using B-spline functions with four residual variance classes and segments were the best fit for genetic evaluation of growth traits in meat-type quail. In conclusion, RRM should be considered in genetic evaluation of breeding programs.

Type
Research Article
Copyright
© The Animal Consortium 2017 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Akaike, H 1974. A new look at the statistical model identification. IEEE Transactions on Automatic Control 19, 716723.Google Scholar
Akbaş, Y, Takma, Ç and Yaylak, E 2004. Genetic parameters for quail body weights using a random regression model. South African Journal of Animal Science 34, 104109.Google Scholar
Albuquerque, LG and El Faro, L 2008. Comparações entre os valores genéticos para características de crescimento de bovinos da raça Nelore preditos com modelos de dimensão finita ou infinita. Revista Brasileira de Zootecnia 37, 238246.Google Scholar
Alkan, S, Mendeş, M, Karabağ, K and Balcioğlu, MS 2009. Effects of short term divergent selection for 5-week body weight on growth characteristics in Japanese quail. Archiv für Geflügelkunde 73, 124131.Google Scholar
Barbieri, A, Ono, RK, Cursino, LL, Farah, MM, Pires, MP, Bertipaglia, TS, Pires, AV, Cavani, L, Carreño, LOD and Fonseca, R 2015. Genetic parameters for body weight in meat quail. Poultry Science 94, 169171.Google Scholar
Boligon, AA, Baldi, F and Albuquerque, LG 2011. Estimates of genetic parameters for scrotal circumference using random regression models in Nelore cattle. Livestock Science 137, 205209.Google Scholar
Boligon, AA, Mercadante, MEZ, Lôbo, RB, Baldi, F and Albuquerque, LG 2012. Random regression analyses using B-spline functions to model growth of Nellore cattle. Animal 6, 212220.Google Scholar
Bonafé, CM, Torres, RA, Sarmento, JLR, Silva, LP, Ribeiro, JC, Teixeira, RB, Silva, FG and Sousa, MF 2011. Modelos de regressão aleatória para descrição da curva de crescimento de codornas de corte. Revista Brasileira de Zootecnia 40, 765771.Google Scholar
Buzała, M, Janicki, B and Czarnecki, R 2015. Consequences of different growth rates in broiler breeder and layer hens on embryogenesis, metabolism and metabolic rate: a review. Poultry Science 94, 728733.Google Scholar
Caron, N, Minvielle, F, Desmarais, M and Poste, LM 1990. Mass selection for 45-day body weight in Japanese quail: selection response, carcass composition, cooking properties, and sensory characteristics. Poultry Science 69, 10371045.Google Scholar
Dionello, NJL, Correa, GSS, Silva, MA, Corrêa, AB and Santos, GG 2008. Estimativas da trajetória genética do crescimento de codornas de corte utilizando modelos de regressão aleatória. Arquivo Brasileiro de Medicina Veterinária e Zootecnia 60, 454460.Google Scholar
Firat, MZ, Karaman, E, Başar, EK and Narinc, D 2016. Bayesian analysis for the comparison of nonlinear regression model parameters: an application to the growth of Japanese quails. Revista Brasileira de Ciência Avícola 18, 1926.Google Scholar
Gonçalves, FM, Pires, AV, Pereira, IG, Drumond, ESC, Felipe, VPS and Pinheiro, SRF 2012. Genetic evaluation of European quails by random regression models. Revista Brasileira de Zootecnia 41, 20052011.Google Scholar
Huisman, AE, Veerkamp, RF and Van Arendonk, JAM 2002. Genetic parameters for various random regression models to describe the weight data of pigs. Journal of Animal Science 80, 575582.Google Scholar
Karaman, E, Firat, MZ and Narinc, D 2014. Single-trait Bayesian analysis of some growth traits in Japanese quail. Brazilian Journal of Poultry Science 16, 5156.Google Scholar
Karaman, E, Narinc, D, Firat, MZ and Aksoy, T 2013. Nonlinear mixed effects modeling of growth in Japanese quail. Poultry Science 92, 19421948.Google Scholar
Khaldari, M, Pakdel, A, Yegane, HM, Javaremi, AN and Berg, P 2010. Response to selection and genetic parameters of body and carcass weights in Japanese quail selected for 4-week body weight. Poultry Science 89, 18341841.Google Scholar
Marks, HL 1996. Long-term selection for body weight in Japanese quail under different environments. Poultry Science 75, 11981203.Google Scholar
Meyer, K 2000. Random regressions to model phenotypic variation in monthly weights of Australian beef cows. Livestock Production Science 65, 1938.Google Scholar
Meyer, K 2001. Estimates of direct and maternal covariance functions for growth of Australian beef calves from birth to weaning. Genetics Selection Evolution 33, 487514.CrossRefGoogle ScholarPubMed
Meyer, K 2004. Scope for a random regression model in genetic evaluation of beef cattle for growth. Livestock Production Science 86, 6983.CrossRefGoogle Scholar
Meyer, K 2005a. Random regression analyses using B-splines to model growth of Australian Angus cattle. Genetics Selection Evolution 37, 473500.Google Scholar
Meyer, K 2005b. Advances in methodology for random regression analyses. Australian Journal of Experimental Agriculture 45, 847859.Google Scholar
Meyer, K 2006. Wombat: a program for mixed model analyses by restricted maximum likelihood. University of New England, Armidale, NSW, Australia.Google Scholar
Minvielle, F 1998. Genetics and breeding of Japanese quail for production around the world. In Proceedings of the 6th Asian Pacific Poultry Congress, 4–7 June 1998, Nagoya, Japan, pp. 122–127.Google Scholar
Mota, LFM, Abreu, LRA, Silva, MA, Pires, AV, Lima, HJD, Bonafé, CM, Costa, LS, Souza, KAR and Martins, PGMA 2015a. Genotype×dietary (methionine+cystine): lysine ratio interaction for body weight of meat-type quails using reaction norm models. Livestock Science 182, 137144.Google Scholar
Mota, LFM, Coimbra, DA, Abreu, LRA, Costa, LS, Pires, AV, Silva, MA, Bonafé, CM, Castro, MR, Lima, HJD and Pinheiro, SRF 2015b. Características de desempenho e de carcaça em diferentes genótipos de codornas de corte. Arquivo Brasileiro de Medicina Veterinária e Zootecnia 67, 613621.Google Scholar
Mrode, RA 2005. Linear models for the prediction of animal breeding values, 2nd edition. CABI Publishing, Cambridge, MA, USA.Google Scholar
Narinç, D, Aksoy, T and Kaplan, S 2016. Effects of multi-trait selection on phenotypic and genetic changes in Japanese quail (Coturnix coturnix japonica). The Journal of Poultry Science 53, 103110.Google Scholar
Narinc, D, Aksoy, T and Karaman, E 2010. Genetic parameters of growth curve parameters and weekly body weights in Japanese quails (Coturnix coturnix japonica). Journal of Animal and Veterinary Advances 9, 501507.Google Scholar
Narinc, D, Karaman, E, Aksoy, T and Firat, MZ 2014. Genetic parameter estimates of growth curve and reproduction traits in Japanese quail. Poultry Science 93, 2430.Google Scholar
R Development Core Team 2015. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.Google Scholar
Resende, RO, Martins, EM, Georg, PC, Paiva, E, Conti, ACM, Santos, AI, Sakaguti, ES and Murakami, AE 2005. Variance components for body weight in Japanese quails (Coturnix japonica). Revista Brasileira de Ciência Avícola 7, 2325.Google Scholar
Rezvannejad, E, Pakdel, A, Miraee Ashtianee, SR, Mehrabani Yeganeh, H and Yaghoobi, MM 2013. Analysis of growth characteristics in short-term divergently selected Japanese quail lines and their cross. The Journal of Applied Poultry Research 22, 663670.Google Scholar
Schwarz, G 1978. Estimating the dimensional of a model. Annals of Statistics 6, 461464.Google Scholar
Schaeffer, LR 2004. Application of random regression models in animal breeding. Livestock Production Science 86, 3545.Google Scholar
Sezer, M 2007. Genetic parameters estimated for sexual maturity and weekly live weights of Japanese quail (Coturnix coturnix japonica). Asian-Australasian Journal of Animal Sciences 20, 1924.Google Scholar
Silva, LP, Ribeiro, JC, Crispim, AC, Silva, FG, Bonafé, CM, Silva, FF and Torres, RA 2013. Genetic parameters of body weight and egg traits in meat-type quail. Livestock Science 153, 2732.CrossRefGoogle Scholar
Toelle, VD, Havenstein, GB, Nestor, KE and Harvey, WR 1991. Genetic and phenotypic relationships in Japanese quail. 1. Body weight, carcass, and organ measurements. Poultry Science 70, 16791688.Google Scholar