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Foreword by Steven Salzberg

Published online by Cambridge University Press:  05 June 2012

William H. Majoros
Affiliation:
Duke University, North Carolina
Steven L. Salzberg
Affiliation:
Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD.
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Summary

When Frederick Sanger sequenced the very first genome – the bacteriophage ϕ-X174 – in 1977, it was clear that DNA sequencing offered a dramatically faster way to find genes than earlier, traditional mapping methods. The small phage genome spans just 5386 bases, about 95% of which is used to encode 11 genes. For this and other viruses, gene finding is fast and easy: the proteins are encoded virtually end-to-end, sometimes even overlapping one another. The early days of DNA sequencing proceeded slowly but with great excitement, as the new technology was applied to small fragments of DNA from many different species. By the mid-1980s, scientists were attempting to automate the sequencing process, which soon led to larger sequencing projects, and in 1989 the Human Genome Project was launched, with the ambitious goal of sequencing the entire 3 billion base pairs of the 24 human chromosomes over the course of the next 15 years. In 1995 a team at The Institute for Genomic Research (TIGR) sequenced the first genome of a free-living organism, the bacterium Haemophilus influenzae, which at 1.8 million base pairs was considerably larger than any genome that had been sequenced before. The H. influenzae genome was the beginning of an enormous outpouring of DNA sequences, fueled by ever-lower sequencing costs and an ever-increasing thirst for new discoveries, that has now produced hundreds of genomes, both large and small.

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Chapter
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Publisher: Cambridge University Press
Print publication year: 2007

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  • Foreword by Steven Salzberg
    • By Steven L. Salzberg, Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD.
  • William H. Majoros, Duke University, North Carolina
  • Book: Methods for Computational Gene Prediction
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511811135.001
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  • Foreword by Steven Salzberg
    • By Steven L. Salzberg, Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD.
  • William H. Majoros, Duke University, North Carolina
  • Book: Methods for Computational Gene Prediction
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511811135.001
Available formats
×

Save book to Google Drive

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

  • Foreword by Steven Salzberg
    • By Steven L. Salzberg, Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD.
  • William H. Majoros, Duke University, North Carolina
  • Book: Methods for Computational Gene Prediction
  • Online publication: 05 June 2012
  • Chapter DOI: https://doi.org/10.1017/CBO9780511811135.001
Available formats
×