Hostname: page-component-848d4c4894-ndmmz Total loading time: 0 Render date: 2024-05-14T02:19:14.165Z Has data issue: false hasContentIssue false

Isolated perfused udder model for transcriptome analysis in response to Streptococcus agalactiae

Published online by Cambridge University Press:  27 August 2019

Mayara M. D. C. A. Weller
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Isabela Fonseca
Affiliation:
Instituto Federal Catarinense, Videira, SC, Brazil
Ana P. Sbardella
Affiliation:
Universidade Estadual Paulista, Jaboticabal, SP, Brazil
Isabella S. B. Pinto
Affiliation:
Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil
Lyderson F. Viccini
Affiliation:
Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil
Humberto M. Brandão
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Juliana C. Gern
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Wanessa A. Carvalho
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Alessandro S. Guimarães
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Maria A. V. P. Brito
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Danísio P. Munari
Affiliation:
Universidade Estadual Paulista, Jaboticabal, SP, Brazil
Marcos V. G. B. Silva
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
Marta F. Martins*
Affiliation:
Embrapa Gado de Leite, Juiz de Fora, MG, Brazil
*
Author for correspondence: Marta F. Martins, Email: marta.martins@embrapa.br

Abstract

This study aimed to evaluate the transcriptional changes occurring in isolated perfused mammary alveolar tissue in response to inoculation with S. agalactiae and to identify the most affected biological functions and pathways after 3 h. Four udders taken at slaughter from cows with healthy mammary gland were perfused ex situ with warmed and gassed Tyrode's solution. Mammary alveolar tissue samples were taken from the left fore and rear quarters (IQ-inoculated quarters) before inoculation (hour 0) and at 3 h post inoculation (hpi) and at the same times from control right fore and rear quarters (not inoculated: NIQ). A total of 1756 differentially expressed genes (DEGs) were identified between IQ and NIQ at 3 hpi using edgeR package. Within this set of DEGs, 952 were up regulated and mainly involved with innate immune response and inflammatory response, e.g., CD14, CCL5, TLR2, IL-8, SAA3, as well as in transcriptional regulation such as FOS, STAT3 and NFKBIA. Genes down-regulated (804) included those involved with lipid synthesis e.g., APOC2, SCD, FABP3 and FABP4. The most affected pathways were chemokine signaling, Wnt signaling and complement and coagulation cascades, which likely reflects the early stage response of mammary tissue to S. agalactiae infection. No significant gene expression changes were detected by RNA-Seq in the others contrasts. Real time-PCR confirmed the increase in mRNA abundance of immune-related genes: TLR2, TLR4, IL-1β, and IL-10 at 3 hpi between IQ and NIQ. The expression profiles of Casp1 and Bax for any contrasts were unaffected whereas Bcl2 was increased in IQ, which suggests no induction of apoptosis during the first hours after infection. Results provided novel information regarding the early functional pathways and gene network that orchestrate innate immune responses to S. agalactiae infection. This knowledge could contribute to new strategies to enhance resistance to this disease, such as genomic selection.

Type
Research Article
Copyright
Copyright © Hannah Dairy Research Foundation 2019 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

Footnotes

*

Present address: Universidade Federal do Espírito Santo, Alegre, ES, Brazil.

References

Ahyi, AN, Quinton, LJ, Jones, MR, Ferrari, JD, Pepper-Cunningham, ZA, Mella, JR, Remick, DG and Mizgerd, JP (2013) Roles of STAT3 in protein secretion pathways during the acute-phase response. Infection and Immunity 5, 16441653.Google Scholar
Anders, S, Pyl, PT and Huber, W (2014) HTSeq – a Python framework to work with high-throughput sequencing data. Bioinformatics (Oxford, England) 31, 14.Google Scholar
Bannerman, DD (2009) Pathogen-dependent induction of cytokines and other soluble inflammatory mediators during intramammary infection of dairy cows. Journal of Animal Science 87, 1025.Google Scholar
Bannerman, DD, Paape, MJ, Lee, JW, Zhao, X, Hope, JC and Rainard, P (2004 a) Escherichia coli and Staphylococcus aureus elicit differential innate immune responses following intramammary infection. Clinical and Diagnostic Laboratory Immunology 11, 463472.Google Scholar
Bannerman, DD, Paape, MJ, Goff, JP, Kimura, K, Lippolis, JD and Hope, JC (2004 b) Innate immune response to intramammary infection with Serratia marcescens and Streptococcus uberis. Veterinary Research 35, 681700.10.1051/vetres:2004040Google Scholar
Bionaz, M and Loor, JJ (2008) Gene networks driving bovine milk fat synthesis during the lactation cycle. BMC Genomics 9, 366.Google Scholar
Cattaneo, R (2004) Four viruses, two bacteria, and one receptor: membrane cofactor protein (CD46) as pathogens’ magnet. Journal of Virology 78, 43854388.Google Scholar
Contreras, GA and Rodríguez, JM (2011) Mastitis: comparative etiology and epidemiology. Journal of Mammary Gland Biology and Neoplasia 16, 339356.Google Scholar
Costa, C, Giménez-Capitán, A, Karachaliou, N and Rosell, R (2013) Comprehensive molecular screening: from the RT-PCR to the RNA-seq. Translational Lung Cancer Research 2, 8791.Google Scholar
Duarte, RS, Miranda, OP, Bellei, BC, Brito, MA and Teixeira, LM (2004) Phenotypic and molecular characteristics of Streptococcus agalactiae isolates recovered from milk of dairy cows in Brazil. Journal of Clinical Microbiology 42, 42144222.Google Scholar
Ehinger, AM and Kietzmann, M (2000) Tissue distribution of oxacillin and ampicillin in the isolated perfused bovine udder. Journal of Veterinary Medicine. A, Physiology, Pathology, Clinical Medicine 47, 157168.Google Scholar
FAANG Consortium, Leif, A, Archibald, AL, Bottema, CD, Brauning, R, Burgess, SC, Burt, DW, Casas, E, Cheng, HH, Clarke, L, Couldrey, C, Dalrymple, BP, Elsik, CG, Foissac, S, Giuffra, E, Groenen, MA, Hayes, BJ, Huang, LS, Khatib, H, Kijas, JW, Kim, H, Lunney, JK, McCarthy, FM, McEwan, JC, Moore, S, Nanduri, B, Notredame, C, Palti, Y, Plastow, GS, Reecy, JM, Rohrer, GA, Sarropoulou, E, Schmidt, CJ, Silverstein, J, Tellam, RL, Tixier-Boichard, M, Tosser-Klopp, G, Tuggle, CK, Vilkki, J, White, SN, Zhao, S and Zhou, H (2015) Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project. Genome Biology 16, 57.Google Scholar
Fonseca, I, Antunes, GR, Paiva, DS, Lange, CC, Guimarães, SE and Martins, MF (2011) Differential expression of genes during mastitis in Holstein-Zebu cross-breed dairy cows. Genetics and Molecular Research 10, 12951303.Google Scholar
Fonseca, I, Cardoso, FF, Higa, RH, Giachetto, PF, Brandão, HM, Brito, MAVP, Ferreira, MBD, Guimarães, SEF and Martins, MF (2015) Gene expression profile in zebu dairy cows (Bos taurus indicus) with mastitis caused by Streptococcus agalactiae. Livestock Science 180, 4757.Google Scholar
Guan, JJ, Zhang, XD, Sun, W, Qi, L, Wu, JC and Qin, ZH (2015) DRAM1 regulates apoptosis through increasing protein levels and lysosomal localization of BAX. Cell Death and Disease 6, e1624.Google Scholar
Günther, J, Koczan, D, Yang, W, Nürnberg, G, Repsilber, D, Schuberth, HJ, Park, Z, Maqbool, N, Molenaar, A and Seyfert, HM (2009) Assessment of the immune capacity of mammary epithelial cells: comparison with mammary tissue after challenge with Escherichia coli. Veterinary Research 40, 31.Google Scholar
Günther, J, Liu, S, Esch, K, Schuberth, HJ and Seyfert, HM (2010) Stimulated expression of TNF-α and IL-8, but not of lingual antimicrobial peptide reflects the concentration of pathogens contacting bovine mammary epithelial cells. Veterinary Immunology and Immunopathology 135, 152157.Google Scholar
Günther, J, Esch, K, Poschadel, N, Petzl, W, Zerbe, H, Mitterhuemer, S, Blum, H and Seyfert, HM (2011) Comparative kinetics of Escherichia coli- and Staphylococcus aureus-specific activation of key immune pathways in mammary epithelial cells demonstrates that S. aureus elicits a delayed response dominated by interleukin-6 (IL-6) but Not by IL-1A or tumor necrosis factor alpha. Infection and Immunity 79, 695707.Google Scholar
Hardwick, DC and Linzell, J (1960) Some factors affecting milk secretion by the isolated perfused mammary gland. Journal of Physiology 154, 547571.Google Scholar
Huang, DW, Sherman, BT and Lempicki, RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nature Protocols 4, 4457.Google Scholar
Huang, J, Luo, G, Zhang, Z, Wang, X, Ju, Z, Qi, C, Zhang, Y, Wang, C, Li, R, Li, J, Yin, W, Xu, Y, Moisá, SJ, Loor, JJ and Zhong, J (2014) iTRAQ-proteomics and bioinformatics analyses of mammary tissue from cows with clinical mastitis due to natural infection with Staphylococci aureus. BMC Genomics 15, 839.Google Scholar
Ibeagha-Awemu, EM, Lee, JW, Ibeagha, AE, Bannerman, DD, Paape, MJ and X, Z (2008) Bacterial lipopolysaccharide induces increased expression of toll-like receptor (TLR) 4 and downstream TLR signaling molecules in bovine. Veterinary Research 39, 1123.Google Scholar
Jenner, RG and Young, RA (2005) Insights into host responses against pathogens from transcriptional profiling. Nature Reviews Microbiology 3, 281294.Google Scholar
Joubert, PE, Meiffren, G, Grégoire, IP, Pontini, G, Richetta, C, Flacher, M, Azocar, O, Vidalain, PO, Vidal, M, Lotteau, V, Codogno, P, Rabourdin-Combe, C and Faure, M (2009) Autophagy induction by the pathogen receptor CD46. Cell Host & Microbe 6, 354366.Google Scholar
Keefe, GP (1997) Streptococcus agalactiae mastitis: a review. Canadian Veterinary Journal 38, 429437.Google Scholar
Kietzmann, M, Löscher, W, Arens, D, Maass, P and Lubach, D (1993) The isolated perfused bovine udder as an in vitro model of percutaneous drug absorption. Skin viability and percutaneous absorption of dexamethasone, benzoyl peroxide, and etofenamate. Journal of Pharmacological and Toxicological Methods 30, 7584.Google Scholar
Kietzmann, M, Niedorf, F and Gossellin, J (2010) Tissue distribution of cloxacillin after intramammary administration in the isolated perfused bovine udder. BMC Veterinary Research 6, 46.Google Scholar
Kosciuczuk, EM, Lisowski, P, Jarczak, J, Majewska, A, Rzewuska, M, Zwierzchowski, L and Bagnicka, E (2017) Transcriptome profiling of Staphylococci-infected cow mammary gland parenchyma. BMC Veterinary Research 13, 161.Google Scholar
Lahouassa, H, Moussay, E, Rainard, P and Riollet, C (2007) Differential cytokine and chemokine responses of bovine mammary epithelial cells to Staphylococcus aureus and Escherichia coli. Cytokine 38, 1221.Google Scholar
Long, E, Capuco, AV, Wood, DL, Sonstegard, T, Tomita, G, Paape, MJ and Zhao, X (2001) Escherichia coli induces apoptosis and proliferation of mammary cells. Cell Death & Differentiation 8, 808816.Google Scholar
Lutzow, YC, Donaldson, L, Gray, CP, Vuocolo, T, Pearson, RD, Reverter, A, Byrne, KA, Sheehy, PA, Windon, R and Tellam, RL (2008) Identification of immune genes and proteins involved in the response of bovine mammary tissue to Staphylococcus aureus infection. BMC Veterinary Research 4, 1825.Google Scholar
Meiffren, G, Joubert, PE, Grégoire, IP, Codogno, P, Rabourdin-Combe, C and Faure, M (2010) Pathogen recognition by the cell surface receptor CD46 induces autophagy. Autophagy 6, 299300.Google Scholar
Molenaar, AJ, Harris, DP, Rajan, GH, Pearson, ML, Callaghan, MR, Sommer, L, Farr, VC, Oden, KE, Miles, MC, Petrova, RS, Good, LL, Singh, K, McLaren, RD, Prosser, CG, Kim, KS, Wieliczko, RJ, Dines, MH, Johannessen, KM, Grigor, MR, Davis, SR and Stelwagen, K (2009) The acute-phase protein serum amyloid A3 is expressed in the bovine mammary gland and plays a role in host defence. Biomarkers 14, 2637.Google Scholar
Moyes, KM, Drackley, JK, Morin, DE, Bionaz, M, Rodriguez-Zas, SL, Everts, RE, Lewin, HA and Loor, JJ (2009) Gene network and pathways analysis of bovine mammary tissue challenged with Streptococcus uberis reveal induction of cell proliferation and inhibition of PPARy signaling as potential mechanism for the negative relationship between immune response and lipid metabolism. BMC Genomics 10, 542.Google Scholar
Noyes, H, Brass, A, Obara, I, Anderson, S, Archibald, AL, Bradley, DG, Fisher, P, Freeman, A, Gibson, J, Gicheru, M, Hall, L, Hanotte, O, Hulme, H, McKeever, D, Murray, C, Oh, SJ, Tate, C, Smith, K, Tapio, M, Wambugu, J, Williams, DJ, Agaba, M and Kemp, SJ (2011) Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection. Proceedings of the National Academy of Sciences of the United States of America 108, 93049309.Google Scholar
NMC (1987) Laboratory and Field Handbook on Bovine Mastitis. NMC (National Mastitis Council), Arlington.Google Scholar
Oviedo-Boyso, J, Valdez-Alarcón, JJ, Cajero-Juárez, M, Ochoa-Zarzosa, A, López-Meza, JE, Bravo-Patiño, A and Baizabal-Aguirre, VM (2007) Innate immune response of bovine mammary gland to pathogenic bacteria responsible for mastitis. Journal of Infection 54, 399409.Google Scholar
Persson, WK, Colditz, IG, Lun, S and Ostensson, K (2003) Cytokines in mammary lymph and milk during endotoxin-induced bovine mastitis. Research in Veterinary Science 74, 3136.Google Scholar
Petzl, W, Zerbe, H, Günther, J, Yang, W, Seyfert, HM, Nürnberg, G and Schuberth, HJ (2008) Escherichia coli but not Staphylococcus aureus triggers an early increased expression of factors contributing to the innate immune defense in the udder of the cow. Veterinary Research 39, 18.Google Scholar
Pinto, IS, Fonseca, I, Brandão, HM, Gern, JC, Guimarães, AS, Carvalho, WA, Brito, MA, Viccini, LF and Martins, MF (2017) Evaluation of perfused bovine udder for gene expression studies in dairy cows. Genetics and Molecular Research 16, 1.Google Scholar
Richards, VP, Choi, SC, Pavinski Bitar, PD, Gurjar, AA and Stanhope, MJ (2013) Transcriptomic and genomic evidence for Streptococcus agalactiae adaptation to the bovine environment. BMC Genomics 14, 920.Google Scholar
Rainard, P (2003) The complement in milk and defense of the bovine mammary gland against infections. Veterinary Research 34, 647670.Google Scholar
Robinson, MD, Mccarthy, DJ and Smyth, GK (2010) Edger: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics (Oxford, England) 26, 139140.Google Scholar
Schukken, YH, Günther, J, Fitzpatrick, J, Fontaine, MC, Goetze, L, Holst, O, Leigh, J, Petzl, W, Schuberth, HJ, Sipka, A, Smith, DG, Quesnell, R, Watts, J, Yancey, R, Zerbe, H, Gurjar, A, Zadoks, RN, Seyfert, HM and members of the Pfizer mastitis research consortium (2011) Host-response patterns of intramammary infections in dairy cows. Veterinary Immunology and Immunopathology 144, 270289Google Scholar
Strandberg, Y, Gray, C, Vuocolo, T, Donaldson, L, Broadway, M and Tellam, R (2005) Lipopolysaccharide and lipoteichoic acid induce different innate immune responses in bovine mammary epithelial cells. Cytokine 31, 7286.Google Scholar
Sun, J, Hobert, ME, Duan, Y, Rao, AS, He, TC, Chang, EB and Madara, JL (2005) Crosstalk between NF-κB and β-catenin pathways in bacterial-colonized intestinal epithelial cells. American Journal of Physiology Gastrointestinal and Liver Physiology 289, G129G137.Google Scholar
Swanson, KM, Stelwagen, K, Dobson, J, Henderson, HV, Davis, SR, Farr, VC and Singh, K (2009) Transcriptome profiling of Streptococcus uberis-induced mastitis reveals fundamental differences between immune gene expression in the mammary gland and in a primary cell culture model. Journal of Dairy Science 92, 117129.Google Scholar
Trapnell, C, Williams, BA, Pertea, G, Mortazavi, A, Kwan, G, van Baren, MJ, Salzberg, SL, Wold, BJ and Pachter, L (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nature Biotechnology 28, 511518.Google Scholar
Trapnell, C, Roberts, A, Goff, L, Pertea, G, Kim, D, Kelley, DR, Pimentel, H, Salzberg, SL, Rinn, JL and Pachter, L (2012) Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nature Protocols 7, 562578.Google Scholar
Wang, X, Zhong, J, Gao, Y, Ju, Z and Huang, J (2014) A SNP in intron 8 of CD46 causes a novel transcript associated with mastitis in Holsteins. BMC Genomics 15, 630.Google Scholar
Weinrauch, Y and Zychlinsky, A (1999) The induction of apoptosis by bacterial pathogens. Annual Review of Microbiology 53, 155187.Google Scholar
Wilson, DJ, Gonzalez, RN, Case, KL, Garrison, LL and Gröhn, YT (1999) Comparison of seven antibiotic treatments with no treatment for bacteriological efficacy against bovine mastitis pathogens. Journal of Dairy Science 82, 16641670.10.3168/jds.S0022-0302(99)75395-6Google Scholar
Supplementary material: PDF

Weller et al. supplementary material

Weller et al. supplementary material 1

Download Weller et al. supplementary material(PDF)
PDF 2.3 MB