Hostname: page-component-78c5997874-94fs2 Total loading time: 0 Render date: 2024-11-18T12:33:01.539Z Has data issue: false hasContentIssue false
  • English
  • Français

The phylogenetic position of Culbersonia is in the Caliciaceae (lichenized ascomycetes)

Published online by Cambridge University Press:  26 April 2019

André Aptroot Open the ORCID record for André Aptroot [Opens in a new window] ,
Khumbudzo Walter Maphangwa ,
Luciana Zedda ,
Memory Tekere ,
Pablo Alvarado  and
Harrie J. M. Sipman
André Aptroot
Affiliation:
Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva s/n, Bairro Universitário, CEP 79070-900, Campo Grande, Matto Grosso do Sul, Brazil. Email: andreaptroot@gmail.com.
Khumbudzo Walter Maphangwa
Affiliation:
Department of Environmental Sciences, University of South Africa (Science Campus), P.O. Box X6, Florida, 1710, South Africa.
Luciana Zedda
Affiliation:
BIO-Diverse, Ließemer Straße 32a, 53179 Bonn, Germany.
Memory Tekere
Affiliation:
Department of Environmental Sciences, University of South Africa (Science Campus), P.O. Box X6, Florida, 1710, South Africa.
Pablo Alvarado
Affiliation:
ALVALAB, Av. Bruselas 2 3B, 33011 Oviedo, Spain.
Harrie J. M. Sipman
Affiliation:
Botanischer Garten und Botanisches Museum, Freie Universität, Königin-Luise-Straße 6–8, 14195 Berlin, Germany.
Get access Rights & Permissions [Opens in a new window]

Abstract

An abstract is not available for this content so a preview has been provided. Please use the Get access link above for information on how to access this content.
Image of the first page of this content. For PDF version, please use the ‘Save PDF’ preceeding this image.'
Type
Short Communication
Information
The Lichenologist , Volume 51 , Issue 2 , March 2019 , pp. 187 - 191
Copyright
Copyright © British Lichen Society 2019 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1997) Basic local alignment search tool. Journal of Molecular Biology 215: 403–410.Google Scholar
Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540–552.Google Scholar
Cubeta, M. A., Echandi, E., Abernethy, T. & Vilgalys, R. (1991) Characterization of anastomosis groups of binucleate Rhizoctonia species using restriction analysis of an amplified ribosomal RNA gene. Phytopathology 81: 1395–1400.Google Scholar
Esslinger, T. L. (2000) Culbersonia americana, a rare new lichen (Ascomycota) from western America. Bryologist 103: 771–773.Google Scholar
Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113–118.Google Scholar
Gaya, E., Högnabba, F., Holguin, Á., Molnar, K., Fernández-Brime, S., Stenroos, S., Arup, U., Søchting, U., van den Boom, P., Lücking, R., et al. (2012) Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota). Molecular Phylogenetics and Evolution 63: 374–387.Google Scholar
Helms, G., Friedl, T. & Rambold, G. (2003) Phylogenetic relationships of the Physciaceae inferred from rDNA sequence data and selected phenotypic characters. Mycologia 95: 1078–1099.Google Scholar
Lücking, R., Hodkinson, B. P. & Leavitt, S. D. (2016) The 2016 classification of lichenized fungi in the Ascomycota and Basidiomycota – approaching one thousand genera. Bryologist 119: 361–416.Google Scholar
Maphangwa, K. W., Sipman, H. J. M., Tekere, M. & Zedda, L. (2018) Epiphytic lichen diversity on Jacaranda and Acacia trees in Pretoria (Tshwane, Republic of South Africa). Herzogia 31: 949–964.Google Scholar
Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., Gaya, E., Hafellner, J., Hofstetter, V., Gueidan, C., et al. (2014) A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution 79: 132–168.Google Scholar
Moberg, R. (1980) Studies on Physciaceae (Lichens) 1. A new species of Pyxine. Norwegian Journal of Botany 27: 189–191.Google Scholar
Moberg, R. (2004) Notes on foliose species of the lichen familiy Physciaceae in southern Africa. Symbolae Botanicae Upsalienses 34: 257–288.Google Scholar
Murray, M. G. & Thompson, W. F. (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 8: 4321–4325.Google Scholar
IIINash, T. H., Ryan, B. D., Gries, C. & Bungartz, F. (eds) (2002) Lichen Flora of the Greater Sonoran Desert Region, Vol. 1. Tempe, Arizona: Lichens Unlimited, Arizona State University.Google Scholar
Nylander, J. A. A. (2004) MrModeltest v2. Program distributed by the author. Uppsala: Evolutionary Biology Centre, Uppsala University.Google Scholar
Obermayer, W., Kalb, K., Sipman, H. J. M. & Nash, T. H. III (2009) New reports of Culbersonia nubila (Moberg) Essl. from the Tibetan Region, Bolivia, Argentina, Lesotho and South Africa. Lichenologist 41: 683–687.Google Scholar
Prieto, M. & Wedin, M. (2017) Phylogeny, taxonomy and diversification events in the Caliciaceae. Fungal Diversity 82: 221–238.Google Scholar
Ronquist, F. & Huelsenbeck, J. P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574.Google Scholar
Schmull, M., Miadlikowska, J., Pelzer, M., Stocker-Wörgötter, E., Hofstetter, V., Fraker, E., Hodkinson, B. P., Reeb, V., Kukwa, M., Lumbsch, H. T., et al. (2011) Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota). Mycologia 103: 983–1003.Google Scholar
Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690.Google Scholar
Swinscow, T. D. V. & Krog, H. (1988) Macrolichens of East Africa. London: British Museum (Natural History).Google Scholar
Swofford, D. L. (2001) PAUP*4.0b10: Phylogenetic Analysis Using Parsimony (and Other Methods). Sunderland, Massachusetts: Sinauer Associates.Google Scholar
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731–2739.Google Scholar
Tibell, L. (1984) A reappraisal of the taxonomy of Caliciales. Beiheft zur Nova Hedwigia 79: 597–713.Google Scholar
Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246.Google Scholar
Wedin, M., Baloch, E. & Grube, M. (2002) Parsimony analyses of mtSSU and nITS rDNA sequences reveal the natural relationships of the lichen families Physciaceae and Caliciaceae. Taxon 51: 655–660.Google Scholar
White, T. J., Bruns, T., Lee, S. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (Innis, M. A., Gelfand, D. H., Sninsky, J. J. & White, T. J., eds): 315–322. New York: Academic Press.Google Scholar