Virtual Observatory (VO) is an emerging astronomical infrastructure for sharing the astronomical data set in the world. National Astronomical Observatory of Japan (NAOJ) started its VO project (Japanese Virtual Observatory – JVO) in 2002, and developed JVO portal prototypes. We have carried out several science use cases, such as cosmic string searches and QSO environment studies, by using the prototype system to examine the functionality of the system. This paper describes a preliminary result of the latter science use case.