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Background: Infantile spasms (IS) is an epileptic encephalopathy, characterized by spasms, hypsarrhythmia, and developmental regression. This is a retrospective case series of children with IS who underwent epilepsy surgery at The Hospital for Sick Children (HSC) in Toronto, Canada. Methods: The records of 223 patients seen in the IS clinic were reviewed. Results: Nineteen patients met inclusion criteria. The etiology of IS was encephalomalacia in six patients (32%), malformations of cortical development in 11 patients (58%), atypical hypoglycaemic injury in one patient (5%), and partial hemimegalencephaly in one patient (5%). Nine patients (47%) underwent hemispherectomy and 10 patients (53%) underwent lobectomy/lesionectomy. Three patients (16%) underwent a second epilepsy surgery. Fifteen patients (79%) were considered ILAE Seizure Outcome Class 1 (completely seizure free; no auras). The percentage of patients who were ILAE Class 1 at most recent follow-up decreased with increasing duration of epilepsy prior to surgery. Developmental outcome was improved in 14/19 (74%) and stable in 5/19 (26%) patients. Conclusions: Our study found excellent seizure freedom rates and improved developmental outcomes following epilepsy surgery in patients with a history of IS with a structural lesion detected on MRI brain.
In May of 2018, PulseNet, the national molecular subtyping network for enteric pathogens, detected a multistate cluster of illnesses caused by an uncommon molecular subtype of Salmonella serovar Mbandaka. A case was defined as an illness in a person infected with the outbreak strain of Salmonella Mbandaka with illness onset on or after 3 March 2018 and before 1 September 2018. One-hundred thirty-six cases from 36 states were identified; 35 hospitalisations and no deaths were reported. Ill people ranged in age from <1 year to 95 years (median: 57 years). When standardised questionnaires did not generate a strong hypothesis, opened-ended interviews were performed. Sixty-three of 84 (75%) ultimately reported consuming or possibly consuming a specific sweetened puffed wheat cereal in the week before illness onset. Environmental sampling performed at the cereal manufacturing facility yielded the outbreak strain. The outbreak strain was also isolated from open cereal samples from ill people's homes and from a sealed retail sample. Due to these findings, the brand owner of the product issued a voluntary recall of the cereal on 14 June 2018. Additional investigation of the manufacturing facility identified persistent environmental contamination with Salmonella Mbandaka that was closely genetically related to other isolates in the outbreak. This investigation highlights the ability of Salmonella to survive in low-moisture environments, and the potential for prolonged outbreaks linked to products with long shelf lives and large distribution areas.
Weedy rice (Oryza sativa f. spontanea Roshev.) has recently become a significant botanical pest in California rice (Oryza sativa L.) production systems. The conspecificity of this pest with cultivated rice negates the use of selective herbicides, rendering the development of nonchemical methods a necessary component of creating management strategies for this weed. Experiments were conducted to determine the emergence and early growth responses of O. sativa spontanea to flooding soil and burial conditions. Treatment combinations of four flooding depths (0, 5, 10, and 15 cm) and four burial depths (1.3, 2.5, 5, and 10 cm) were applied to test the emergence of five O. sativa spontanea accessions as well as ‘M-206’, a commonly used rice cultivar in California, for comparison. Results revealed that burial depth had a significant effect on seedling emergence. A 43% to 91% decrease in emergence between seedlings buried at 1.3 and 2.5 cm depending on the flooding depth and accession and an absence of emergence from seedlings buried at or below 5 cm were observed. Flooding depth did not affect emergence, but there was a significant interaction between burial and flooding treatments. There was no significant difference between total O. sativa spontanea emergence from the soil and water surfaces regardless of burial or flooding depths, implying that once the various accessions have emerged from the soil they will also emerge from the floodwater. Most accessions had similar total emergence compared with M-206 cultivated rice but produced more dry weight than M-206 when planted at 1.3 cm in the soil. The results of this experiment can be used to inform stakeholders of the flooding conditions necessary as well as soil burial depths that will promote or inhibit the emergence of California O. sativa spontanea accessions from the weed seedbank.
Background: Infantile spasms (IS) is an epileptic encephalopathy, characterized by epileptic spasms, hypsarrhythmia, and developmental regression. This is a retrospective case series detailing the experience in children with IS who have undergone epilepsy surgery at The Hospital for Sick Children (HSC). Methods: Records of 223 patients from HSC were reviewed. Patients were included if they had a current or previous history of IS with a lesion detected on MRI/PET scan who underwent epilepsy surgery. Results: Nineteen patients were included. The etiology of IS was encephalomalacia in six patients (32%), malformations of cortical development in 11 patients (58%), atypical hypoglycaemic injury in one patient (0.5%), and partial hemimegalencephaly in one patient (0.5%). The median age at the onset of IS was five months. The median age at surgery was 18 months. Nine patients (47%) underwent hemispherectomy and 10 patients (53%) underwent lobectomy/lesionectomy. Fifteen patients (79%) were considered ILAE Seizure Outcome Class 1. Developmental outcome was improved in 14/19 (74%) and stable in 5/19 (26%) patients. Conclusions: Even with a generalized EEG pattern such as hypsarrhythmia, patients should be considered for focal resective surgery. Early surgical intervention shortens the duration of active epilepsy thus limiting the potentially irreversible effects of on-going seizures.
Late watergrass is a competitive weed of rice that is well adapted to both aerobic and anaerobic environments. Cultural controls such as a stale-seedbed and alternating from wet- to dry-seeding have been proposed as management options. However, the effects of these systems on its emergence and early growth are unknown. The objective of this study was to modify a previously developed population-based threshold model (PBTM) to predict emergence and early growth under field conditions. In 2013, a series of experiments were conducted at the California Rice Experiment Station (CRES) in Biggs, CA, to evaluate emergence and early growth of multiple herbicide–resistant and -susceptible late watergrass at four burial depths (0.5, 2, 4, and 6 cm) under three irrigation regimes: continuously flooded (CF), daily flush (DF), and intermittent flush (IF). Resistant plants emerged at a significantly higher rate under the IF treatment (P < 0.05). Both biotypes showed decreasing emergence with increasing depth, and no plants emerged from the 4- or 6-cm depths in the CF treatment. Using the Gompertz growth curve, resistant plants had greater predicted growth rates (k), lower predicted maximum heights (hmax), and a shorter time to predicted maximum growth rate (tm) than susceptible plants under the CF and DF treatments. Under the IF treatment, the susceptible plants had greater k, lower hmax, and shorter time to predicted tm. Information about burial depth and irrigation was incorporated into a previously developed PBTM for late watergrass, and validated at the CRES in a field with a susceptible late watergrass population in 2013 and 2014, under two irrigation systems, CF and IF. Model fit was best in the CF treatments (average Akaike information criteria [AIC] = 199.05) compared to the IF treatments (average AIC = 208.6).
In a survey of adult hospital providers regarding antibiotic use in the treatment of febrile neutropenia, clinical fellows, and pharmacists showed higher comfort levels with early antimicrobial de-escalation compared to hematology-oncology and transplant infectious diseases physicians. These frontline team members are ideal partners to champion antimicrobial stewardship interventions in febrile neutropenia.
OBJECTIVES/GOALS: Recent studies indicate B cells are involved in dermal fibroblast activation and collagen deposition in the skin. However, B cell distribution in epidermal and dermal layers is unknown. Here, We aim to characterize the distribution of B cells residing in normal skin and keloidal scars. METHODS/STUDY POPULATION: One abdominal normal skin sample and two keloid samples (ear and shoulder) were obtained from the University of Colorado Biorepository Core Facility and from the Plastic Surgery Clinics. Five micron sections from formalin-fixed paraffin-embedded samples were prepared for multiplex fluorescence immunohistochemistry by the Human Immunology & Immunotherapy Initiative. We stained for CD20+, CD19+, and DAPI. Slides were imaged using Vectra®3 scanning system from PerkinElmer. Images were analyzed in InForm®Tissue Finder, phenotpr, phenoptrReports by Akoya biosciences. RESULTS/ANTICIPATED RESULTS: We found a significant increase in the percentage of CD20+ and CD19+ B cells in keloid skin compared to normal skin tissue (14.50% and 14.20% vs 6.47% and 7.56% of the total cells), respectively. Interestingly, we found that in the epidermis of keloid skin CD20+ cell were more abundant (14.46%) whereas in the epidermis normal skin CD20+ cells were less predominant (5.14%). In the dermis of keloid skin, CD20+ and CD19+ were in equal proportions (13%) whereas in normal skin CD19+ cells were more predominant (10.44%) compared to CD20+ cells (7.04%). Dual positive B cells, CD19+/CD20+ cells, were more abundant in keloid dermis (11.06%) compared to normal skin dermis (1.24%). DISCUSSION/SIGNIFICANCE OF IMPACT: B cells are involved in fibroblast activation in diseases such as scleroderma and rheumatoid arthritis. With the increase of CD19+/CD20+ B cells in keloids, the role of B cells in keloid pathogenesis warrants further study. CD27 staining may determine if these are activated or follicular B cells.
This article examines provincial policy influence on long-term care (LTC) professionals’ advice-seeking networks in Canada’s Maritime provinces. The effects of facility ownership, geography, and region-specific political landscapes on LTC best-practice dissemination are examined. We used sociometric statistics and network sociograms, calculated from surveys with 169 senior leaders in LTC facilities, to identify advice-seeking network structures and to select 11 follow-up interview participants. Network structures were distinguished by density, sub-group number, opinion leader, and boundary spanner distribution. Network structure was affected by ownership model in Nova Scotia and Prince Edward Island, and by regional geography in New Brunswick. Political instability within each province’s LTC system negatively affected network actors’ capabilities to enact innovation. Moreover, provincial policy variations influence advice-seeking network structures, facilitating and constraining relationship development and networking. Consequently, local policy context is essential to informing dissemination strategy design or implementation.
Foodborne salmonellosis causes approximately 1 million illnesses annually in the United States. In the summer of 2017, we investigated four multistate outbreaks of Salmonella infections associated with Maradol papayas imported from four Mexican farms. PulseNet initially identified a cluster of Salmonella Kiambu infections in June 2017, and early interviews identified papayas as an exposure of interest. Investigators from Maryland, Virginia and Food and Drug Administration (FDA) collected papayas for testing. Several strains of Salmonella were isolated from papayas sourced from Mexican Farm A, including Salmonella Agona, Gaminara, Kiambu, Thompson and Senftenberg. Traceback from two points of service associated with illness sub-clusters in two states identified Farm A as a common source of papayas, and three voluntary recalls of Farm A papayas were issued. FDA sampling isolated four additional Salmonella strains from papayas sourced from Mexican Farms B, C and D. In total, four outbreaks were identified, resulting in 244 cases with illness onset dates from 20 December 2016 to 20 September 2017. The sampling of papayas and the collaborative work of investigative partners were instrumental in identifying the source of these outbreaks and preventing additional illnesses. Evaluating epidemiological, laboratory and traceback evidence together during investigations is critical to solving and stopping outbreaks.
OBJECTIVES/SPECIFIC AIMS: “Loss to follow up” is a common phenomenon and challenge in clinical medicine. Missed appointments are a well-documented source of waste in the health care system, and can lead to strained patient-physician relationships and inferior quality of care. Meningiomas are relatively common, benign tumors that arise from the dural coverings of the brain. Although complete surgical resection is considered curative, surgically excised meningiomas have a well-documented propensity to recur, necessitating continued imaging surveillance of postresection patients. A recent retrospective study at our institute demonstrated that 20% of postresection patients fail to return for follow up within a year of their surgery. Although social determinants of health have been associated with failure to follow up in this population, there has been no research identifying patient-reported barriers that result in loss to follow up in this patient population. The purpose of this study is to identify specific barriers that prevent patients from returning for surveillance. METHODS/STUDY POPULATION: We used an IRB approved, prospective brain tumor clinical database to identify patients who underwent surgical resection of intracranial meningioma at our institution between 2001 and 2013. “Loss to follow up” was defined as failure to attend follow-up appointments with neurosurgery, radiation oncology, or neuro-oncology within a year of the most recent assigned follow-up interval, as recorded in the electronic medical record. Structured interviews were conducted with patients who met study criteria and specific barriers to follow-up were elicited, transcribed, and coded. In 2 cases, a primary caregiver participated in all or portions of the interview with the patient. A general assessment of patient knowledge about meningioma and a screening for basic health literacy were also conducted. RESULTS/ANTICIPATED RESULTS: There were 80 patients in the brain tumor clinical database met chart review criteria for inclusion in the study. A total of 9 structured interviews were conducted; 1 interview was excluded from analysis for failure to meet study criteria. In total, 24 unique obstacles to follow up were recorded. These were stratified and grouped into 4 broad categories: 2 of 8 (25%) patients identified environmental factors, including distance to appointment and challenges with insurance coverage as barriers to follow up; 2 patients (25%) identified psychosocial factors, including poor communication with and distrust of their neurosurgeon as barriers to follow up; 2 (25%) patients identified health factors, including poor health and old age, as barriers to follow up; 6 patients identified healthcare systems factors as barriers to follow up, with 6 patients (75%) reporting seeing a non-specialist for follow up after surgery and 4 patients (50%) reporting not being told by their neurosurgeon that they would need continued follow up. Of those patients seen by non-specialists, only 1 reported any recent brain imaging by those providers. All patients had limited to no prior knowledge of meningiomas before their diagnosis. Four (50%) patients reported satisfaction with the level education about meningiomas they received from their physician. Of these patients, 3 (75%) correctly reported that meningiomas may recur following surgery. Of the patients who did not report satisfaction with physician counseling, 3 (75%) did not realize that meningiomas can recur. DISCUSSION/SIGNIFICANCE OF IMPACT: Healthcare system factors, including uncoordinated transition of postoperative care to non-neurosurgeons and uncertain postoperative surveillance schedules, represent that most common patient-identified barriers to follow up after meningioma resection. Improving transition of care from specialists to non-specialists, including designation of appropriate imaging surveillance schedules, as well as improving communication between specialists and patients about the need for continued follow up, represent clear points for intervention that could improve care for this patient population. In addition, consistent and clear counseling about meningioma and its disease course may reduce loss to follow up following meningioma resection. It is important to note, however, that the small sample size represents a significant limitation of the study.
A submerged delta of the Merrimack River, located offshore between Cape Ann, Massachusetts, and the New Hampshire border, indicates a postglacial low relative see-level stand of about −47 m. The low stand is inferred to date to 10,500 yr B.P., but a lack of age control makes this assignment uncertain. A curve based on a late Wisconsinan, high relative sea-level stand of +32m at 13,000 yr B.P., a low stand of −47m at 10,500 yr B.P., and younger radiocarbon dates related to sea-level rise indicates an early postglacial crustal rise of at least 5 m per century.
State-level income tax policy is a hotly debated topic in both academic and political spheres. Although economic theory and some empirical analyses suggest that larger income tax burdens affect migration decisions, there is also a good deal of empirical evidence showing that tax policy has little to no effect. This lack of consensus in the academic literature is echoed in the political world, where many states are debating whether to eliminate income taxes or reduce rates as a means of spurring economic growth. Connecticut’s adoption of an income tax policy in 1991 provides a unique opportunity to analyse the impact of a sizable income tax policy change on migration. The results suggest that Connecticut’s income tax deterred movement into the state but had no impact on exit from the state, resulting in a net loss in migration.
Although many pests constrain rice production, weeds are considered to be the major barrier to achieving optimal yields. A predictive model based on naturally occurring mixed-species infestations in the field would enable growers to target the specific weed group that is the greatest contributor to yield loss, but as of now no such models are available. In 2013 and 2014, two empirical hyperbolic models were tested using the relative cover at canopy closure of groups of weed species as independent variables: grasses, sedges, broadleaves, grasses and sedges combined, grasses and broadleaves combined, and all weed species combined. Models were calibrated using data from experiments conducted at the California Rice Experiment Station, in Biggs, CA, and validated across four sites over 2 years, for a total of 7 site-year combinations. Of the three major weed groups, grasses, sedges, and broadleaves, the only groups positively related to yield loss in the multispecies infestation were grasses. At the model calibration site, grasses and sedges combined best predicted yield loss (corrected Akaike information criterion [AICc]=−21.5) in 2013, and grasses alone best predicted yield loss (AICc=−19.0) in 2014. Across the validation sites, the model using grasses and sedges combined was the best predictor in 5 out of 7 site-years. Accuracy of the predicted values at the model validation sites ranged from 6% mean average error to 17% mean average error. No single model and set of parameters accurately predicted losses across all years and locations, but relative cover of grasses and sedges combined at canopy closure was the best estimate over the most sites and years.
Over the last 10 yr, California has experienced a series of ever-worsening droughts. Rice, traditionally a flooded crop, has come under increasing scrutiny with respect to its water use, leading to proposals to evaluate alternative irrigation systems. For growers, weed competition is one of the most limiting factors to maintaining high yields, so understanding the shifts among species in weed communities under the proposed alternative irrigation systems is vital. A field study was conducted from 2012 to 2014 to compare weed population and growth dynamics with three irrigation systems: (1) a conventional water-seeded control system (WS-Control), with a permanent flood of 10 to 15 cm from planting until 1 mo prior to harvest; (2) a water-seeded alternate wet and dry system (WS-AWD), with the field flooded from planting until canopy closure, after which floodwater was allowed to subside and the field was reflooded when the soil volumetric water content reached 35%; and (3) a drill-seeded alternate wet and dry system (DS-AWD), with rice drill seeded and then flush irrigated to establish the crop, after which the field was flooded until canopy closure and then underwent an alternate wet and dry (AWD) treatment similar to WS-AWD. In the AWD treatments, there were two drying periods, neither of which occurred after the heading stage. The dynamics of major weed species were evaluated using plant density counts (2012) and relative cover and biomass (2013 and 2014). Grasses (sprangletop and watergrass species) dominated the DS-AWD system; sedges, broadleaves, and grasses dominated both WS systems. The WS-AWD system increased smallflower umbrella sedge relative cover at canopy closure, relative dry weight at harvest, and percent frequency when compared with the WS-Control system. Yields did not differ across treatments when weeds were controlled (P>0.05); in the absence of herbicides, yields in the WS-AWD were equivalent to the WS-Control (ranging from 40 to 65% of the herbicide-treated yields) and zero in the DS-AWD due to weed pressure.
Fragmentation poses one of the greatest threats to freshwater fish biodiversity (Nilsson et al., 2005; Reidy-Liermann et al., 2012). Whereas damming of large rivers is perhaps the most obvious form of fragmentation (e.g., Nilsson et al., 2005), smaller, semipermeable barriers such as road crossings (Perkin & Gido, 2012) or water withdrawals that dry sections of a river network (Falke et al., 2011) also pose a conservation challenge. In glacial regions, lakes that are naturally connected through waterways are increasingly being isolated by summer evaporation and groundwater loss (Baki et al., 2012). Climate and land-use changes also isolate populations in headwater reaches by increasing temperatures (Rahel et al., 1996) or drying of streams (Falke et al., 2011) in downstream reaches. Finally, barriers can form when the occurrence of a species, such as a large predator, inhibits the movement of prey through a dispersal corridor (Fraser et al., 1995). This severing of connectivity in aquatic habitats affects species persistence through multiple stressors (Chapters 4 and 6) including limiting dispersal necessary to fulfil important life stages, exacerbating negative species interactions, and inhibiting recolonisation following disturbance. Barriers to movement isolate small populations leading to reduced genetic diversity (Chapter 16) and potentially compromise long-term population persistence (e.g. Wofford et al., 2005).
In this chapter, we discuss how fragmentation disrupts dispersal and migration of freshwater fishes and the long-term consequences for population diversity and stability. We begin with a global overview of the problem followed by a review of theoretical and empirical methods for quantifying the effects of fragmentation on population viability. We conclude with a discussion of conservation challenges along with future research and management recommendations. The primary tenet of our review is that persistence of species in fragmented systems is dependent on the nature of barriers to dispersal and ecological traits of species, particularly their ability to complete critical life-history stages within fragmented habitats (Figure 10.1). We often refer to the terms fragmentation, isolation and connectivity. Whereas there are instances where these might be used interchangeably, we consider fragmentation to represent habitats that have been partitioned into smaller habitats and by extension result in smaller populations. The terms connectivity and isolation refer to the ability or lack of ability, respectively, of fishes to disperse into or out of particular habitats.
We compare first-order (refractive) ionospheric effects seen by the MWA with the ionosphere as inferred from GPS data. The first-order ionosphere manifests itself as a bulk position shift of the observed sources across an MWA field of view. These effects can be computed from global ionosphere maps provided by GPS analysis centres, namely the CODE. However, for precision radio astronomy applications, data from local GPS networks needs to be incorporated into ionospheric modelling. For GPS observations, the ionospheric parameters are biased by GPS receiver instrument delays, among other effects, also known as receiver DCBs. The receiver DCBs need to be estimated for any non-CODE GPS station used for ionosphere modelling. In this work, single GPS station-based ionospheric modelling is performed at a time resolution of 10 min. Also the receiver DCBs are estimated for selected Geoscience Australia GPS receivers, located at Murchison Radio Observatory, Yarragadee, Mount Magnet and Wiluna. The ionospheric gradients estimated from GPS are compared with that inferred from MWA. The ionospheric gradients at all the GPS stations show a correlation with the gradients observed with the MWA. The ionosphere estimates obtained using GPS measurements show promise in terms of providing calibration information for the MWA.
GLEAM, the GaLactic and Extragalactic All-sky MWA survey, is a survey of the entire radio sky south of declination + 25° at frequencies between 72 and 231 MHz, made with the MWA using a drift scan method that makes efficient use of the MWA’s very large field-of-view. We present the observation details, imaging strategies, and theoretical sensitivity for GLEAM. The survey ran for two years, the first year using 40-kHz frequency resolution and 0.5-s time resolution; the second year using 10-kHz frequency resolution and 2 s time resolution. The resulting image resolution and sensitivity depends on observing frequency, sky pointing, and image weighting scheme. At 154 MHz, the image resolution is approximately 2.5 × 2.2/cos (δ + 26.7°) arcmin with sensitivity to structures up to ~ 10° in angular size. We provide tables to calculate the expected thermal noise for GLEAM mosaics depending on pointing and frequency and discuss limitations to achieving theoretical noise in Stokes I images. We discuss challenges, and their solutions, that arise for GLEAM including ionospheric effects on source positions and linearly polarised emission, and the instrumental polarisation effects inherent to the MWA’s primary beam.
The Murchison Widefield Array is a Square Kilometre Array Precursor. The telescope is located at the Murchison Radio–astronomy Observatory in Western Australia. The MWA consists of 4 096 dipoles arranged into 128 dual polarisation aperture arrays forming a connected element interferometer that cross-correlates signals from all 256 inputs. A hybrid approach to the correlation task is employed, with some processing stages being performed by bespoke hardware, based on Field Programmable Gate Arrays, and others by Graphics Processing Units housed in general purpose rack mounted servers. The correlation capability required is approximately 8 tera floating point operations per second. The MWA has commenced operations and the correlator is generating 8.3 TB day−1 of correlation products, that are subsequently transferred 700 km from the MRO to Perth (WA) in real-time for storage and offline processing. In this paper, we outline the correlator design, signal path, and processing elements and present the data format for the internal and external interfaces.
The science cases for incorporating high time resolution capabilities into modern radio telescopes are as numerous as they are compelling. Science targets range from exotic sources such as pulsars, to our Sun, to recently detected possible extragalactic bursts of radio emission, the so-called fast radio bursts (FRBs). Originally conceived purely as an imaging telescope, the initial design of the Murchison Widefield Array (MWA) did not include the ability to access high time and frequency resolution voltage data. However, the flexibility of the MWA’s software correlator allowed an off-the-shelf solution for adding this capability. This paper describes the system that records the 100 μs and 10 kHz resolution voltage data from the MWA. Example science applications, where this capability is critical, are presented, as well as accompanying commissioning results from this mode to demonstrate verification.
We present the results of an approximately 6 100 deg2 104–196 MHz radio sky survey performed with the Murchison Widefield Array during instrument commissioning between 2012 September and 2012 December: the MWACS. The data were taken as meridian drift scans with two different 32-antenna sub-arrays that were available during the commissioning period. The survey covers approximately 20.5 h < RA < 8.5 h, − 58° < Dec < −14°over three frequency bands centred on 119, 150 and 180 MHz, with image resolutions of 6–3 arcmin. The catalogue has 3 arcmin angular resolution and a typical noise level of 40 mJy beam− 1, with reduced sensitivity near the field boundaries and bright sources. We describe the data reduction strategy, based upon mosaicked snapshots, flux density calibration, and source-finding method. We present a catalogue of flux density and spectral index measurements for 14 110 sources, extracted from the mosaic, 1 247 of which are sub-components of complexes of sources.