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Coupled in vitro synthesis and splicing of RNA polymerase II transcripts

Published online by Cambridge University Press:  01 September 2000

SAGARMOY GHOSH
Affiliation:
Department of Genetics, Duke University Medical Center, Durham, North Carolina 27710, USA
MARIANO A. GARCIA-BLANCO
Affiliation:
Department of Genetics, Duke University Medical Center, Durham, North Carolina 27710, USA Departments of Microbiology and Medicine, Duke University Medical Center, Durham, North Carolina 27710, USA
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Abstract

Compelling in vivo studies suggest a tight functional linkage between RNA polymerase II transcription and pre-messenger RNA splicing. At present, the specific interactions involved in this coupling are poorly understood and deserve investigation. To this end, we developed an in vitro system that permits study of coupled transcription and splicing. Transcripts generated by RNA polymerase II were accurately and efficiently spliced under reaction conditions that permitted both transcription and splicing to occur simultaneously. The splicing of RNA-polymerase-II-driven transcripts was accelerated relative to that of the same transcripts driven by T7 RNA polymerase. Moreover, the product of exon ligation was found associated with the DNA template in reactions driven by RNA polymerase II. These two findings indicate that transcription and splicing were coupled in the in vitro system driven by RNA polymerase II, and suggest that this system will be useful for the biochemical study of this coupling.

Type
METHOD
Information
RNA , Volume 6 , Issue 9 , September 2000 , pp. 1325 - 1334
Copyright
2000 RNA Society

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