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Molecular epidemiology of large coronavirus disease 2019 (COVID-19) clusters before and after the implementation of routine serial testing at an academic medical center in Iowa, 2020

Published online by Cambridge University Press:  24 June 2021

Miguel E. Ortiz
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Takaaki Kobayashi
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Katherine Imborek
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Mohammed Alsuhaibani
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Stephanie Holley
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Alexandra Trannel
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Alexandre R. Marra
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States Instituto Israelita de Ensino e Pesquisa Albert Einstein, Hospital Israelita Albert Einstein, São Paulo, Brazil
William Etienne
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Kyle E. Jenn
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Oluchi J. Abosi
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Holly Meacham
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Lorinda Sheeler
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Angelique Dains
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Mary E. Kukla
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Paul B. McCray Jr
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Stanley Perlman
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Bradley Ford
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Daniel J. Diekema
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Melanie Wellington
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Alejandro A. Pezzulo*
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
Jorge L. Salinas*
Affiliation:
University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa, United States
*
Author for correspondence: Jorge L. Salinas, E-mail: jorge-salinas@uiowa.edu. Or Alejandro A. Pezzulo, E-mail: alejandro-pezzulo@uiowa.edu
Author for correspondence: Jorge L. Salinas, E-mail: jorge-salinas@uiowa.edu. Or Alejandro A. Pezzulo, E-mail: alejandro-pezzulo@uiowa.edu

Abstract

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Type
Research Brief
Copyright
© The Author(s), 2021. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America

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Footnotes

a

Authors of equal contribution.

b

Authors of equal contribution.

References

Sastry, SR, Pryor, R, Raybould, JE, et al. Universal screening for the SARS-CoV-2 virus on hospital admission in an area with low COVID-19 prevalence. Infect Control Hosp Epidemiol 2020;41:12311233.CrossRefGoogle Scholar
Klompas, M, Baker, MA, Rhee, C, et al. A SARS-CoV-2 cluster in an acute-care hospital. Ann Intern Med 2021. doi: 10.7326/M20-7567.CrossRefGoogle Scholar
Kobayashi, T, Trannel, A, Holley, SA, et al. COVID-19 serial testing among hospitalized patients in a Midwest tertiary medical center, July–September 2020. Clin Infect Dis 2020. doi: 10.1093/cid/ciaa1630.CrossRefGoogle Scholar
Quick, J. nCoV-2019 sequencing protocol v2 (GunIt). protocols.io website. 2020. doi: 10.17504/protocols.io.bdp7i5rn.CrossRefGoogle Scholar
Meredith, LW, Hamilton, WL, Warne, B, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study. Lancet Infect Dis 2020;20:12631271.CrossRefGoogle ScholarPubMed
Chan, ER, Jones, LD, Redmond, SN, et al. Use of whole-genome sequencing to investigate a cluster of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections in emergency department personnel. Infect Control Hosp Epidemiol 2021. doi: 10.1017/ice.2021.208.CrossRefGoogle Scholar
Taylor, J, Carter, RJ, Lehnertz, N, et al. Serial testing for SARS-CoV-2 and virus whole genome sequencing inform infection risk at two skilled nursing facilities with COVID-19 outbreaks—Minnesota, April–June 2020. Morb Mortal Wkly Rep 2020;69:12881295.CrossRefGoogle ScholarPubMed

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Molecular epidemiology of large coronavirus disease 2019 (COVID-19) clusters before and after the implementation of routine serial testing at an academic medical center in Iowa, 2020
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Molecular epidemiology of large coronavirus disease 2019 (COVID-19) clusters before and after the implementation of routine serial testing at an academic medical center in Iowa, 2020
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