In experiments with neutral beam injection at the early stage of a Globus-M discharge, instabilities were observed that were excited by fast ions in the frequency range of 50–200 kHz, which were identified as toroidal Alfvén eigenmodes (TAE) (Petrov et al., Plasma Phys. Rep., vol. 37, 2011, pp. 1001–1005). In contradiction with the NSTX and MAST tokamaks, a regime of TAE generation was realized with strongly developed single modes. Magnetic measurements with fast Mirnov probes have shown that most of the modes have toroidal number $n=1$. The influence of the modes on the fast particle confinement was recorded by means of a tangentially directed neutral particle analyser (NPA) and neutron detector. Hydrogen and deuterium were used as target plasma and injected beam for study of the isotopic effect. At deuterium injection into the deuterium plasma, TAE led to the neutron rate dropping by 25 %, whereas NPA fluxes of high energy dropped by 75 %. At hydrogen injection, the drop in the measured NPA fluxes did not exceed 25 %.