Alizadeh, Z., Kageyama, S. & Aoki, F. (2005). Degradation of maternal mRNA in mouse embryos., selective degradation of specific mRNAs after fertilization. Mol. Reprod. Dev. 72, 281–90.
Aoki, F., Hara, K.T. & Schultz, R.M. (2003). Acquisition of transcriptional competence in the 1-cell mouse embryo, requirement for recruitment of maternal mRNAs. Mol. Reprod. Dev. 64, 270–4.
Bachvarova, R. & De Leon, V. (1980). Polyadenylated RNA of mouse ova and loss of maternal RNA in early development. Dev. Biol. 74, 1–8.
Barnes, F.L. & Eyestone, W.H. (1990). Early cleavage and the maternal zygotic transition in bovine embryos. Theriogenology 33, 141–9.
Bettegowda, A., Patel, O.V., Ireland, J.J. & Smith, G.W. (2006). Quantitative analysis of messenger RNA abundance for ribosomal protein L-15, cyclophilin-A, phosphoglycerokinase, B-glucuronidase, glyceraldehyde 3-phosphate dehydrogenase, B-actin and histone H2A during bovine oocyte maturation and early embryogenesis in vitro. Mol. Reprod. Dev. 73, 267–78.
Bilodeau-Goeseels, S. & Panich, P. (2002). Effects of oocyte quality on development and transcriptional activity in early bovine embryos. Anim. Reprod. Sci. 71, 143.
Blondin, P. & Sirard, M.A. (1995). Oocyte and follicular morphology as determined characteristics for developmental competence in bovine oocytes. Mol. Reprod. Dev. 41, 54–62.
Brevini, T.A., Lonergan, P., Cillo, F., Francisci, C., Favetta, L.A., Fair, T. & Gandolfi, F. (2002). Evolution of mRNA polyadenylation between oocyte maturation and first embryonic cleavage in cattle and its relation with developmental competence. Mol. Reprod. Dev. 63, 510–7.
Brevini-Gandolfi, T.A., Favetta, L.A., Maurri, L., Luciano, A.M., Cillo, F. & Gandolfi, F. (1999). Changes in poly(A) tail length of maternal transcripts during in vitro maturation of bovine oocytes and their relation with developmental competence. Mol. Reprod. Dev. 52, 427–33.
Dalbies-Tran, R. & Mermillod, P. (2003). Use of heterologous complementary DNA array screening to analyze bovine oocyte transcriptome and its evolution during in vitro maturation. Biol. Reprod. 68, 252–61.
Deprez, R.H.L., Fijnvandraat, A.C., Ruijter, J.M. & Moorman, A.F.M. (2002). Sensitivity and accuracy of quantitative real-time polymerase chain reaction using SYBR green I depend on cDNA synthesis conditions. Anal. Biochem. 307, 63–9.
Donnison, M. & Pfeffer, P.L. (2004). Isolation of genes associated with developmentally competent bovine oocytes and quantitation of their levels during development. Biol. Reprod. 71, 1813–21.
Eichenlaub-Ritter, U. & Peschke, M. (2002). Expression in in-vivo and in-vitro grown and maturing oocytes, focus on regulation of expression at the translational level. Human Reprod. Update 8, 21–41.
Fair, T., Hyttel, P. & Greve, T. (1995). Bovine oocyte diameter in relation to maturational competence and transcriptional activity. Mol. Reprod. Dev. 42, 437–42.
Fair, T., Murphy, M., Rizos, D., Moss, C., Martin, F., Boland, MP. & Lonergan, P. (2004). Analysis of differential maternal mRNA expression in developmentally competent and incompetent bovine two-cell embryos. Mol. Reprod. Dev. 67, 136–44.
Gordon, I. (1994). Laboratory Production of Cattle Embryos, p. 640. Oxon: CAB International.
Hamatani, T., Carter, M.G., Sharov, A.A. & Ko, M.S. (2004). Dynamics of global gene expression changes during mouse preimplantation development. Dev. Cell 6, 117–31.
Han, D., Song, S., Uhum, S.J., Do, J., Kim, N., Chung, K. & Lee, H.T. (2003). Expression of IGF2 and IGF receptor mRNA in bovine nuclear transferred embryos. Zygote 11, 245–52.
Hawk, H.W. & Wall, R.J. (1994). Improved yields of bovine blastocysts from in vitro-produced oocytes. II. Media and co-culture cells. Theriogenology 41, 1585.
Hyttel, P., Fair, T., Callesen, H. & Greve, T. (1997). Oocyte growth, capacitation and final maturation in cattle. Theriogenology 47, 23–32.
Iscove, N.N., Barbara, M., Gu, M., Gibson, M., Modi, C. & Winegarden, N. (2002). Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA. Nat. Biotechnol. 20, 940–3.
Jakobsen, A.S., Avery, B., Dieleman, S.J., Knijn, H.M., Vos, P.L. & Thomsen, P.D. (2006). Transcription of ribosomal RNA genes is initiated in the third cell cycle of bovine embryos. Mol. Reprod. Dev. 73, 196–205.
Kastrop, P.M., Bevers, M.M., Destree, O.H. & Kruip, T.A. (1991). Protein synthesis and phosphorylation patterns of bovine oocytes maturing in vivo. Mol. Reprod. Dev. 29, 271–5.
Kulpa, D., Topping, R. & Telesnitsky, A. (1997). Determination of the site of first strand transfer during Moloney murine leukemia virus reverse transcription and identification of strand transfer-associated reverse transcriptase errors. EMBO J. 16, 856–65.
Lequarre, A.S., Traverso, J.M., Marchandise, J. & Donnay, I. (2004). Poly(A) RNA is reduced by half during bovine oocyte maturation but increases when meiotic arrest is maintained with CDK inhibitors. Biol. Reprod. 71, 425–31.
Liss, B. (2002). Improved quantitative real-time RT-PCR for expression profiling of individual cells. Nucleic Acid Res. 30, e89.
Lonergan, P., Rizos, D., Ward, F. & Boland, M.P. (2001). Factors influencing oocyte and embryo quality in cattle. Reprod. Nutr. Dev. 41, 427–37.
Lonergan, P., Rizos, D., Gutiérrez-Adán, A., Moreira, P.M., Pintado, B., de la Fuente, J. & Boland, M.P. (2003). Temporal divergence in the pattern of messenger RNA expression in bovine embryos cultured from the zygote to blastocyst stage in vitro or in vivo. Biol. Reprod. 69, 1424–31.
Meirelles, F.V., Caetano, A.R., Watanabe, Y.F., Ripamonte, P., Carambula, S.F., Merighe, G.K. & Garcia, S.M. (2004). Genome activation and developmental block in bovine embryos. Anim. Reprod. Sci. 82–3, 13–20.
Memili, E. & First, N.L. (1999). Control of gene expression at the onset of bovine embryonic development. Biol. Reprod. 61, 1198–207.
Memili, E. & First, N.L. (2000). Zygotic and embryonic gene expression in cow, a review of timing and mechanisms of early gene expression as compared with other species. Zygote 8, 87–96.
Mourot, M., Dufort, I., Gravel, C., Algriany, O., Dieleman, S. & Sirard, M.A. (2006). The influence of follicle size, FSH-enriched maturation medium and early cleavage on bovine oocytes maternal mRNA levels. Mol. Reprod. Dev. 73, 1367–79.
Nagy, Z.B., Kelemen, J.Z., Fehér, L.Z., Zvara, A., Juház, K. & Puskás, L.G. (2005). Real time polymerase chain reaction-based exponential sample amplification for microarray gene expression profiling 337, 76–83.
Neilson, L., Andalibi, A., Kang, D., Coutifaris, C., Strauss, J.F., 3rd, Stanton, J.A. & Green, D.P. (2000). Molecular phenotype of the human oocyte by PCR–SAGE. Genomics 63, 13–24.
Parrish, J.J., Susku-Parrish, J., Winer, M.A. & First, N.L. (1988). Capacitation of bovine sperm by heparin. Biol. Reprod. 38, 1171–80.
Pavlok, A., Lucas-Hahn, A. & Niemann, H. (1992). Fertilization and developmental competence of bovine oocytes derived from different categories of antral follicles. Mol. Reprod. Dev. 31, 63–7.
Payton, B.V., Rempel, R. & Bachvarova, R. (1988). Changes in state of adenylation and time course of degradation of maternal mRNAs during oocyte maturation and early embryonic development in the mouse. Dev. Biol. 129, 304–24.
Pennetier, S., Uzbekova, S., Perreau, C., Papillier, P., Mermillod, P. & Dalbies-Tran, R. (2004). Spatio-temporal expression of the germ cell marker genes MATER, ZAR1, GDF9, BMP15, and VASA in adult bovine tissues, oocytes and preimplantation embryos. Biol. Reprod. 71, 1359–66.
Perez, G.I., Tao, X.J. & Tilly, J.L. (1999). Fragmentation and death (a.k.a. apoptosis) of ovulated oocytes. Mol. Hum. Reprod. 5, 414–20.
Pfaffl, M.W. (2001). A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acid Res. 29, 2002–7.
Pfaffl, M.W., Horgan, G.W. & Dempfle, L. (2002). Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acid Res. 30, e36.
Piccioni, F., Zappavigna, V. & Verrotti, A.Translational regulation during oogenesis and early development, the cap-poly(A) tail relationship. C R Biol. (2005). 328, 863–81.
Picton, H., Briggs, D. & Gosden, R. (1998). The molecular basis of oocyte growth and development. Mol. Cell. Endocrinol. 145, 27–37.
Pikó, L. & Clegg, K.B. (1982). Quantitative changes in total RNA, total poly(A) and ribosomes in early mouse embryos. Dev. Biol. 89, 362–78.
Plante, L., Plante, C., Shepherd, D.L. & King, W.A. (1994). Cleavage and 3H-uridine incorporation in bovine embryos of high in vitro developmental potential. Mol. Reprod. Dev. 39, 375–83.
Ramakers, C., Ruijter, J., Deprez, R.H.L. & Moorman, A.F.M. (2003). Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neuroscience Letts. 339, 62–6.
Robert, C., McGraw, S., Massicotte, L., Pravetoni, M., Gandolfi, F. & Sirard, M.A. (2002). Quantification of housekeeping transcript levels during the development of bovine preimplantation embryos. Biol. Reprod. 67, 1465–72.
Roller, R.J., Kinloch, R.A., Hiraoka, B.Y., Li, S.S. & Wassarman, P.M. (1989). Gene expression during mammalian oogenesis and early embryogenesis, quantification of three messenger RNAs abundant in fully grown mouse oocytes. Development 106, 251–61.
Sakurai, T., Sato, M. & Kimura, M. (2005). Diverse patterns of poly(A) tail elongation and shortening of murine maternal mRNAs from fully grown oocyte to 2-cell embryo stages. Biochem. Biophys. Res. Commun. 336, 1181–9.
Salamone, D.F., Adams, G.P. & Mapletoft, R.J. (1999). Changes in the cumulus–oocyte complex of subordinate follicles relative to follicular wave status in cattle. Theriogenology 52, 549–61.
Seth, D., Gorrell, M.D., McGuiness, P.H., Leo, M.A., Lieber, C.S., McCaughan, G.W. & Haber, P.S. (2003). SMART amplification maintains representation of relative gene expression., quantitative validation by real time PCR and application to studies of alcoholic liver disease in primates. J. Biochem. Biophys. Methods 55, 53–66.
Seveg, H., Memili, E. & First, N.L. (2001). Expression patterns of histone deacetylases in bovine oocytes and early embryos and the effect of their inhibition on embryo development. Zygote 9, 123–33.
Sirard, M.A., Florman, H.M., Leibfried-Rutledge, M.L., Barnes, F.L. & Sims, M.L. & First, N.L. (1989). Timing of nuclear progression and protein synthesis necessary for meiotic maturation of bovine oocytes. Biol. Reprod. 40, 1257–63.
Sirard, M.A., Dufort, I., Vallee, M., Massicotte, L., Gravel, C., Reghenas, H., Watson, A.J., King, W.A. & Robert, C. (2005). Potential and limitations of bovine-specific arrays for the analysis of mRNA levels in early development., preliminary analysis using a bovine embryonic array. Reprod. Fertil. Dev. 17, 47–57.
Sirard, M-A., Richard, F., Blondin, P. & Robert, C. (2006). Contribution of the oocyte to embryo quality. Theriogenology 65, 126.
Telford, N.A., Watson, A.J. & Schultz, G.A. (1990). Transition from maternal to embryonic control in early mammalian development. A comparison of several species. Mol. Reprod. Dev. 26, 90–100.
Tesfaye, D., Ponsuksili, S., Wimmers, K., Gilles, M. & Schellander, K. (2003). Identification and quantification of differentially expressed transcripts in in vitro-produced bovine preimplantation stage embryos. Mol. Reprod. Dev. 66, 105–14.
Van Blerkom, J. & Davis, P.W. (1998). DNA strand breaks and phosphatidylserine redistribution in newly ovulated and cultured mouse and human oocytes., occurrence and relationship to apoptosis. Hum. Reprod. 13, 1317–24.
Vigneault, C., McGraw, S., Massicotte, L. & Sirard, M.A. (2004). Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition. Biol. Reprod. 70, 1701–9.
Yuan, Y.Q., Van Soom, A., Leroy, J.L., Dewulf, J., Van Zeveren, A., de Kruif, A. & Peelman, L.J. (2005). Apoptosis in cumulus cells., but not in oocytes., may influence bovine embryonic developmental competence. Theriogenology 63, 2147–63.
Zeng, F., Baldwin, D.A. & Schultz, R.M. (2004). Transcript profiling during preimplantation mouse development. Dev. Biol. 272, 483–96.
Zhu, Y.Y., Machleder, E.M., Chenchik, A., Li, R. & Siebert, P.D. (2001). Reverse transcriptase template switching, a SMART approach for full-length cDNA library construction. Biotechniques 30, 892–7.