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A Pipeline for Distributed Segmentation of Teravoxel Tomography Datasets

Published online by Cambridge University Press:  10 August 2018

Mehdi Tondravi ,
William Scullin ,
Ming Du ,
Rafael Vescovi ,
Vincent De Andrade ,
Chris Jacobsen ,
Konrad Paul Kording ,
Doga Gursoy  and
Eva Dyer
Mehdi Tondravi
Affiliation:
Chemistry of Life Processes Institute, Northwestern University, Evanston, ILUSA
William Scullin
Affiliation:
Argonne Leadership Computing Facility, Argonne National Lab, Lemont, ILUSA
Ming Du
Affiliation:
Dept. Materials Science, Northwestern University, Evanston, ILUSA
Rafael Vescovi
Affiliation:
Advanced Photon Source, Argonne National Lab, Lemont, ILUSA
Vincent De Andrade
Affiliation:
Advanced Photon Source, Argonne National Lab, Lemont, ILUSA
Chris Jacobsen
Affiliation:
Chemistry of Life Processes Institute, Northwestern University, Evanston, ILUSA Advanced Photon Source, Argonne National Lab, Lemont, ILUSA Dept. Physics & Astronomy, Northwestern University, Evanston, ILUSA
Konrad Paul Kording
Affiliation:
Dept. Bioengineering and Neuroscience, University of Pennsylvania, Philadelphia, USA
Doga Gursoy
Affiliation:
Advanced Photon Source, Argonne National Lab, Lemont, ILUSA Dept. Electrical Engineering and Computer Sci., Northwestern University, Evanston, ILUSA

Abstract

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Abstract
Information
Microscopy and Microanalysis , Volume 24 , Supplement S2: Proceedings of the 14th International Conference on X-ray Microscopy (XRM2018) , August 2018 , pp. 164 - 165
Copyright
© Microscopy Society of America 2018 

References

References:

[1] Sommer, C., et al in "2011 8th IEEE International Symposium on Biomedical Imaging (ISBI 2011) " ( IEEE , New York ) p. 230. See also www.ilastik.org.Google Scholar
[2] Dyer, E., et al., eNeuro 4 2017) E0195-17.2017.Google Scholar
[3] This work was funded by the National Institutes of Health under grant U01 MH109100, and U.S. Department of Energy, Office of Science, Offices of Advanced Scientific Computing Research and Basic Energy Sciences via Contract No. DE-AC02-06CH11357..Google Scholar