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Modeling Protein Structure in Macromolecular Assemblies at Near Atomic Resolutions

  • Matthew L. Baker (a1), Muyuan Chen (a1) (a2), Philip R. Baldwin (a1), Steven J. Ludtke (a1) and Wah Chiu (a1)...
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References

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[1] Baker, ML, Zhang, J, Ludtke, SJ & Chiu, W. Cryo-EM of macromolecular assemblies at near-atomic resolution. Nat Protoc (2010). Sep;5(10), 16971708. PMCID: PMC3107675.
[2] Baker, MR, Rees, I, Ludtke, SJ, Chiu, W & Baker, ML. Constructing and validating initial Ca models from subnanometer resolution density maps with pathwalking. Structure. 2012 Mar 7;20(3), 450463. PMCID: PMC3307788.
[3] Baker, ML, Baker, MR, Hryc, CF, Ju, T & Chiu, W. Gorgon and pathwalking: macromolecular modeling tools for subnanometer resolution density maps. Biopolymers. 2012 Sep;97(9), 655668. PMCID: PMC3899894.
[4] Wang, Z, Hryc, CF, Bammes, B, Afonine, PV, Jakana, J, Chen, DH, Liu, X, Baker, ML, Kao, C, Ludtke, SJ, Schmid, MF, Adams, PD & Chiu, W. An atomic model of brome mosaic virus using direct electron detection and real-space optimization. Nat Commun. 2014 Sep 4;5, 4808. PMCID: PMC4155512.
[5] This work was supported by grants from the National Institutes of Health (P41GM103832, R01GM079429, R21GM100229), and National Science Foundation (DBI-1356306).

Modeling Protein Structure in Macromolecular Assemblies at Near Atomic Resolutions

  • Matthew L. Baker (a1), Muyuan Chen (a1) (a2), Philip R. Baldwin (a1), Steven J. Ludtke (a1) and Wah Chiu (a1)...

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