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Building and Validating Atomic Models for Cryo-EM Density Maps

  • Matthew L. Baker (a1), Muyuan Chen (a1) (a2), Tunay Durmaz (a1), Phil Baldwin (a1), Tao Ju (a3) and Steven J. Ludtke (a1)...
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References

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[1] Baker, M. L., Baker, M. R., Hryc, C. F. & Dimaio, F. Methods Enzymol 483 (2010). p 129.
[2] Baker, M. L., Baker, M. R., Hryc, C. F., Ju, T. & Chiu, W. (2012). Biopolymers 97(2012 p. 655668.
[3] Wang., Z., Hryc, C.F., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.C., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.A. & Chiu, W. Nat Commun 5 (2014). p 4808.
[4] Baker, M. L., Hryc, C. F., Zhang, Q., Wu, W., Jakana, J., Haase-Pettingell, C., Afonine, P. V., Adams, P. D., King, J. A., Jiang, W. & Chiu, W. (2013). Proc Natl Acad Sci USA 110(2013 p. 1230112306.
[5] Baker, M. L., Abeysinghe, S. S., Schuh, S., Coleman, R. A., Abrams, A., Marsh, M. P., Hryc, C. F., Ruths, T., Chiu, W. & Ju, T. J Struct Biol 174 (2010). p 360373.
[6] Dao, H., Baker, M. L. & Ju, T. (2015). The Visual Computer 31(2015 p. 961977.
[7] Baker, M. R., Rees, I., Ludtke, S. J., Chiu, W. & Baker, M. L. Structure 20 (2012). p 450463.
[8] The authors acknowledge funding from NIH (1R21GM100229, 5R01GM079429 and 8P41GM103832) and NSF (DBI-1408887).

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