Bérard-Therriault, L., Poulin, M. and Bossé, L. (1999) Guide d'identification du phytoplancton marin de l'estuaire et du Golfe du Saint-Laurent incluant également certains protozoaires. Ottawa: CNRC–NRC.
Bode, A. and Dortch, Q. (1996) Uptake and regeneration of inorganic nitrogen in coastal waters influenced by the Mississippi River: spatial and seasonal variations. Journal of Plankton Research 18, 2251–2268.
Bojanić, N., Šolić, M., Krstulović, N., Šestanović, S., Marasović, I. and Ninčević, Ž. (2005) Temporal variability in abundance and biomass of ciliates and copepods in the eutrophicated part of Kaštela Bay (Middle Adriatic Sea). Helgoland Marine Research 59, 107–120.
Bonacci, O. (2001) Analysis of the maximum discharge of karst spring. Hydrogeology Journal 9, 328–338.
Braunschweig, F., Martins, F., Chambel, P. and Neves, R. (2003) A methodology to estimate renewal time scales in estuaries: the Tagus estuary case. Ocean Dynamics 53, 137–145.
Bresnan, E., Hay, S., Hughes, S.L., Fraser, S., Rasmussen, J., Webster, L., Slesser, G., Dunn, J. and Heath, M.R. (2009) Seasonal and interannual variation in the phytoplankton community in the north east of Scotland. Journal of Sea Research 61, 17–25.
Burić, Z., Viličić, D., Cetinić, I., Caput, K., Carić, M. and Olujić, G. (2005) Taxonomic composition of phytoplankton in the Zrmanja estuary (Adriatic Sea). Periodicum Biologorum 107, 305–312.
Burić, Z., Cetinić, I., Viličić, D., Caput Mihalić, K., Carić, M. and Olujić, G. (2007) Spatial and temporal distribution of phytoplankton in a highly stratified estuary (Zrmanja, Adriatic Sea). Marine Ecology 28, 169–177.
Cassie, R.M. (1962) Frequency distribution models in the ecology of plankton and other organisms. Journal of Animal Ecology 31, 65–92.
Cetinić, I., Viličić, D., Burić, Z. and Olujić, G. (2006) Phytoplankton seasonality in a highly stratified karstic estuary (Krka, Adriatic Sea). Hydrobiologia 555, 31–40.
Chícharo, L., Chícharo, M.A. and Ben-Hamadou, R. (2006) Use of a hydrotechnical infrastructure (Alqueva Dam) to regulate planktonic assemblages in the Guadiana estuary: basis for the sustainable water and ecosystem services management. Estuarine, Coastal and Shelf Science 70, 3–18.
Christian, R.R., Boyer, J.N. and Stanley, D.W. (1991) Multi-year distribution patterns of nutrients within the Neuse River Estuary, North Carolina. Marine Ecology Progress Series 71, 259–274.
Cloern, J.E., Alpine, A.E., Cole, B.E., Wong, R.L.J., Arthur, J.F. and Ball, M.D. (1983) River discharge controls phytoplankton dynamics in northern San Francisco Bay estuary. Estuarine, Coastal and Shelf Science 16, 415–429.
Cloern, J.E. and Jassby, A.D. (2010) Patterns and scales of phytoplankton variability in estuarine–coastal ecosystems. Estuaries and Coasts 33, 230–241.
Costa, L.S., Huszar, V.L.M. and Ovalle, A.R. (2009) Phytoplankton functional groups in a tropical estuary: hydrological control and nutrient limitation. Estuaries and Coasts 32, 508–521.
Cupp, E.E. (1943) Marine plankton diatoms of the west coast of North America. Bulletin of the Scripps Institution of Oceanography 5, 1–238.
Daly Yahia-Kéfi, O., Souissi, S., Gómez, F. and Daly Yahia, M.N. (2005) Spatio-temporal distribution of the dominant diatom and dinoflagellate species in the Bay of Tunis (SW Mediterranean Sea). Mediterranean Marine Science 6, 17–34.
Day, J.W., Hall, C.A.S., Kemp, W.M. and Yanez-Arancibia, A. (1989) Estuarine ecology. New York: John Wiley and Sons.
Domingues, R.B., Barbosa, A. and Galvão, H. (2005) Nutrients, light and phytoplankton succession in a temperate estuary (the Guadiana, south-western Iberia). Estuarine, Coastal and Shelf Science 64, 249–260.
Domingues, R.B. and Galvão, H. (2007) Phytoplankton and environmental variability in a dam regulated temperate estuary. Hydrobiologia 586, 117–134.
Dong, L.F., Nedwell, D.B. and Stott, A. (2006) Sources of nitrogen used for denitrification and nitrous oxide formation in sediments of the hypernutrified Colne, the nutrified Humber, and the oligotrophic Conwy estuaries, United Kingdom. Limnology and Oceanography 51, 545–557.
Dorth, Q. and Whitledge, T.E. (1992) Does nitrogen or silicon limit phytoplankton production in the Mississippi River plume and nearby regions? Continental Shelf Research 12, 1293–1309.
Dyer, K.R. (1991) Circulation and mixing in stratified estuaries. Marine Chemistry 32, 111–120.
Fisher, T.R., Harding, L.W., Stanley, D.W. and Ward, L.G. (1988) Phytoplankton, nutrients and turbidity in the Chesapeake, Delaware and Hudson estuaries. Estuarine, Coastal and Shelf Science 27, 61–93.
Glé, C., Del Amo, Y., Sautour, B., Laborde, P. and Chardy, P. (2008) Variability of nutrients and phytoplankton primary production in a shallow macrotidal coastal ecosystem (Arcachon Bay, France). Estuarine, Coastal and Shelf Science 76, 642–656.
Gobler, J.C., Cullison, L.A., Koch, F., Harder, T.M. and Krause, J.W. (2005) Influence of freshwater flow, ocean exchange, and seasonal cycles on phytoplankton-nutrient dynamics in a temporarily open estuary. Estuarine, Coastal and Shelf Science 65, 275–288.
Gordon, D.C. Jr,Boudreau, P.R., Mann, K.H., Ong, J.-E., Silvert, W.L., Smith, S.V., Wattayakorn, G., Wulff, F. and Yanagi, T. (1996) LOICZ Biogeochemical Modelling Guidelines. LOICZ Reports and Studies No 5, 1–96.
Grasshoff, K., Ehrhardt, M. and Kremling, K. (1983) Methods of seawater analysis. 2nd editon. Weinheim: Verlag Chemie GmbH.
Gržetić, Z. (1990) Basic hydrologic and chemical properties of Krka estuary. PhD thesis. Institute Rudjer Bošković, Zagreb, Croatia.
Hasle, G.R. and Syvertsen, E.E. (1996) Marine diatoms. In Tomas, C.R. (ed.) Identifying marine diatoms and dinoflagellates. San Diego, CA: Academic Press, pp. 5–385
Heimdal, B.R. (1993) Modern coccolithophorids. In Tomas, C.R. (ed.) Marine phytoplankton: a guide to naked flagellates and coccolithophorids. San Diego, CA: Academic Press, pp. 147–247.
Ho, A.Y.T., Xu, J., Yin, K., Jiang, Y., Yuan, X., He, L., Anderson, D.M., Lee, J.H.W. and Harrison, P.J. (2010) Phytoplankton biomass and production in subtropical Hong Kong waters: influence of the Pearl River outflow. Estuaries and Coasts 33, 170–181.
Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W. and Strickland, J.D.H. (1965) Fluorometric determination of chlorophyll. Journal du Conseil, Conseil Permanent International pour l'Exploration de la Mer, Copenhague 301, 3–15.
Horner, R.A. (2002) A taxonomic guide to some common phytoplankton. Dorchester: Biopress Limited, Dorset Press.
Hustedt, F. (1930) Die Kieselalgen Deutschlands, Österreichs und der Schweiz mit Berücksichtigung der übrigen Länder Europas sowie der angrenzenden Meeresgebeite. Rabenhorst's Kryptogramen-Flora von Deutschland, Österreich und der SchweizBand VII. Leipzig: Akademische Verlagsgesellschaft m. b. H.
Ibaňez, C., Pont, D. and Prat, N. (1997) Characterization of the Ebre and Rhone estuaries: a basis for defining and classifying salt-wedge estuaries. Limnology and Oceanography 42, 89–101.
ICES (2007) Report of the Working group of zooplankton ecology (WGZE), 26–29 March 2007, Riga, Latvia. ICES CM 2007/OCC, 04, 68 pp.
Ivančić, I. and Degobbis, D. (1984) An optimal manual procedure for ammonia analysis in natural waters by the indophenol blue method. Water Research 18, 1143–1147.
Jasprica, N. and Carić, M. (1997) A comparison of phytoplankton biomass estimators and their environmental correlates in the Mali Ston Bay (Southern Adriatic). P.S.Z.N.: Marine Ecology 18, 35–50.
Jasprica, N. and Carić, M. (2001) Planktonic diatoms and their relation to environmental factors at three stations in the Southern Adriatic, Mediterranean Sea. In Jahn, R., Kociolek, J.P., Witkowski, A. and Compère, P. (eds) Lange-Bertalot-Festschrift: Studies on Diatoms. Berlin: Gantner, Ruggell, pp. 517–536.
Jeong, H.J., Yoo, Y.D., Park, J.Y., Song, J.Y., Kim, S.T., Lee, S.H., Kim, K.Y. and Yih, W.H. (2005) Feeding by phototrophic red-tide dinoflagellates: five species newly revealed and six species previously known to be mixotrophic. Aquatic Microbial Ecology 40, 133–150.
Kasai, A., Kurikawa, Y., Ueno, M., Robert, D. and Yamashita, Y. (2010) Salt-wedge intrusion of seawater and its implication for phytoplankton dynamics in the Yura Estuary, Japan. Estuarine, Coastal and Shelf Science 86, 408–414.
Kimmerer, W.J. (2002) Physical, biological, and management responses to variable freshwater flow into the San Francisco estuary. Estuaries 25, 1275–1290.
Kimmerer, W.J. (2005) Long-term changes in apparent uptake of silica in the San Francisco estuary. Limnology and Oceanography 50, 793–798.
Klausmeier, C.A., Litchman, E., Daufresne, T. and Levin, S.A. (2004) Optimal nitrogen-to-phosphorus stoichiometry of phytoplankton. Nature 429, 171–174.
Kohl, J.G. and Niklisch, A. (1988) Ökophysiologie der Algen. Berlin: Akademie Verlag.
Kocum, E., Nedwell, D.B. and Underwood, J.C. (2002) Regulation of phytoplankton primary production along a hypernutrified estuary. Marine Ecology Progress Series 231, 13–22.
Kršinić, F. (1980) Comparison of methods used in micro-zooplankton research in neritic waters of the Eastern Adriatic. Nova Thalassia 4, 91–106.
Kršinić, F., Viličić, D., Jasprica, N., Carić, M. and Mikuš, J. (1991) Ekološke karakteristike i onečišćenje Gruškog zaljeva. Pomorski Zbornik 29, 355–381.
Lehman, P.W. (2007) The influence of phytoplankton community composition on primary productivity along the riverine to freshwater tidal continuum in the San Joaquin River, California. Estuaries and Coasts 30, 82–93.
Lemaire, E., Abril, G., De Wit, R. and Etcheber, H. (2002) Distribution of phytoplankton pigments in nine European estuaries and implications for an estuarine typology. Biogeochemistry 59, 5–23.
Lionard, M., Muylaert, K., Hanoutti, A., Maris, T., Tackx, M. and Vyverman, W. (2008) Inter-annual variability in phytoplankton summer blooms in the freshwater tidal reaches of the Schelde estuary (Belgium). Estuarine, Coastal and Shelf Science 79, 694–700.
Lopes, C.B., Lillebo, A.I., Dias, J.M., Pereira, E., Vale, C. and Duarte, A.C. (2007) Nutrient dynamics and seasonal succession of phytoplankton assemblages in a Southern European estuary: Ria de Aveiro, Portugal. Estuarine, Coastal and Shelf Science 71, 480–490.
Mallin, M.A., Paerl, H.W. and Rudek, J. (1991) Seasonal phytoplankton composition, productivity and biomass in the Neuse River Estuary, North Carolina. Estuarine, Coastal and Shelf Science 32, 609–623.
Malone, T.C., Crocker, L.H., Pike, S.E. and Wendler, B.W. (1988) Influence of river flow on the dynamics of phytoplankton production in a partially stratified estuary. Marine Ecology Progress Series 48, 235–249.
Marshall, H.G., Burchardt, L. and Lacouture, R. (2005) A review of phytoplankton composition within Chesapeake Bay and its tidal estuaries. Journal of Plankton Research 27, 1083–1102.
Nedwell, D.B., Dong, L.F., Sage, A. and Underwoodl, G.J.C. (2002) Variations of the nutrient loads to the mainland UK estuaries: correlation with catchment areas, urbanization and coastal eutrophication. Estuarine, Coastal and Shelf Science 54, 951–970.
Neill, M. (2005) A method to determine which nutrient is limiting for plant growth in estuarine waters—at any salinity. Marine Pollution Bulletin 50, 945–955.
Nixon, S. (1995) Coastal marine eutrophication—a definition, social causes, and future concerns. Ophelia 41, 199–219.
Olujić, G., Mihanović, H., Carić, M. and Gržetić, Z. (2007) Exchange of water in the stratified Zrmanja Estuary (Adriatic Sea). In Ozhan, Erdal (ed.) Proceedings of the Eighth International Conference on the Mediterranean Coastal: MEDCOAST 07 Ankara: MEDCOAST Secretariat, 1-1473-1-1473, pp. 1245–1252.
Pennock, J.R. and Sharp, J.H. (1986) Phytoplankton production in the Delaware estuary: temporal and spatial variability. Marine Ecology Progress Series 34, 143–155.
Polat, S. and Piner, M.P. (2002) Nutrients and phytoplankton in the Babadillimani Bight, northeastern Mediterranean coast of Turkey. Indian Journal of Marine Sciences 31, 188–194.
Redfield, A.C., Ketchum, B.H. and Richards, A. (1963) The influence of organisms on the composition of sea water. In Hill, M.M. (ed.) The sea, volume 2. New York: Wiley Interscience, pp. 26–77.
Rocha, C., Galvão, H. and Barbosa, A. (2002) Role of transient silicon limitation in the development of cyanobacteria blooms in the Guadiana estuary, south-western Iberia. Marine Ecology Progress Series 228, 35–45.
Saraiva, S., Pina, P., Martins, F. and Santos, M. (2007) Modelling the influence of nutrient loads on Portuguese estuaries. Hydrobiologia 587, 5–18.
Sierra, J.P., Sánchez-Arcilla, A., González Del Río, J., Flos, J., Movellán, E., Mösso, C., Martínez, R., Rodilla, M., Falcoand, S. and Romero, I. (2002) Spatial distribution of nutrients in the Ebro estuary and plume. Continental Shelf Research 22, 361–378.
Sin, Y., Wetzel, R.L. and Anderson, I.C. (2000) Seasonal variations of size-fractionated phytoplankton along the salinity gradient in the York River estuary, Virginia (USA). Journal of Plankton Research 22, 1945–1960.
Smith, V.H. (2006) Responses of estuarine and coastal marine phytoplankton to nitrogen and phosphorus enrichment. Limnology and Oceanography 51, 377–384.
Soetaert, K., Middelburg, J.J., Heip, C., Meire, P., van Damme, S. and Maris, T. (2006) Long-term change in dissolved inorganic nutrients in the heterotrophic Sheldt estuary (Belgium, The Netherlands). Limnology and Oceanography 51, 409–423.
Sommer, U. (1991) The application of the Droop-model of nutrient limitation to natural populations of phytoplankton. Verhandlungen des Internationalen Verein Limnologie 24, 791–794.
Steele, J.H. (1974) The structure of marine ecosystems. Cambridge, MA: Harvard University Press.
Steidinger, K.A. and Tangen, K. (1996) Dinoflagellates. In Tomas, C.R. (ed.) Identifying marine diatoms and dinoflagellates. San Diego, CA: Academic Press, pp. 387–584.
Stonik, V. and Selina, M.S. (2001) Species composition and seasonal dynamics of density and biomass of euglenoids in Peter the Great bay, Sea of Japan. Russian Journal of Marine Biology 27, 174–176.
Strickland, J.D.H. (1958) Solar radiation penetrating the ocean. A review of requirements, data and methods of measurements with particular reference to photosynthetic productivity. Journal of the Fisheries Research Board of Canada 15, 453–493.
Strickland, J.D.H. and Parsons, T.R. (1972) A practical handbook of seawater analysis. Bulletin of the Fisheries Research Board of Canada 167, 1–311.
Šolić, M., Krstulović, N., Kušpilić, G., Ninčević Gladan, Ž., Bojanić, N., Šestanović, S., Šantić, D. and Ordulj, M. (2010) Changes in microbial food web structure in response to changed environmental trophic status: a case study of the Vranjic Basin (Adriatic Sea). Marine Environmental Research 70, 239–249.
Throndsen, J. (1993) The planktonic marine flagellates. In Tomas, C.R. (ed.) Marine phytoplankton: a guide to naked flagellates and coccolithophorids. San Diego, CA: Academic Press, pp. 7–145.
UNESCO (1973) International Oceanographic Tables, Volume II. Paris: NIO–UNESCO.
Utermöhl, H. (1958) Zur Vervollkommnung der quantitativen Phytoplankton-Metodik. Mitteilungen Internationale Vereinigung für Limnologie 9, 1–38.
Vidjak, O., Bojanić, N., Kušpilić, G., Grbec, B., Ninčević-Gladan, Ž., Matijević, S. and Brautović, I. (2009) Population structure and abundance of zooplankton along the Krka river estuary in spring 2006. Acta Adriatica 50, 45–58.
Vieira, M.E.C. and Bordalo, A.A. (2000) The Douro estuary (Portugal): a mesotidal salt wedge. Oceanologica Acta 23, 585–594.
Viličić, D., Jasprica, N. and Carić, M. (1995a) The Ombla River estuary: phytoplankton blooming, eutrophication and protection. In Tropan, L. (ed.) The Proceedings of 2nd Croatian Conference on Waters, Dubrovnik, 24–27 May, Zagreb: Hrvatsko društvo za zaštitu voda i mora, pp. 497–506.
Viličić, D., Kršinić, F., Carić, M., Jasprica, N., Bobanović-Ćolić, S. and Mikuš, J. (1995b) Plankton and hydrography in a moderately eutrophicated eastern Adriatic bay (Gruž Bay). Hydrobiologia 304, 9–22.
Viličić, D. (2002) Fitoplankton Jadranskog mora. Biologija i taksonomija. Zagreb: Školska knjiga.
Weiss, R.F. (1970) The solubility of nitrogen, oxygen and argon in water and seawater. Deep-Sea Research 17, 721–735.
Williams, J.A. and Muxagata, E. (2006) The seasonal abundance and production of Oithona nana (Copepoda: Cyclopoida) in Southampton Water. Journal of Plankton Research 28, 1055–1065.
Yin, K., Quian, P.Y, Wu, M.C.S., Chen, J.C., Huang, L., Song, X. and Jian, W.J. (2001) Shift from P to N limitation of phytoplankton biomass across the Pearl River estuarine plume during summer. Marine Ecology Progress Series 221, 17–28.
Zhou, M.J., Shen, Z.L. and Yu, R.C. (2008) Responses of a coastal phytoplankton community to increased nutrient input from the Changjiang (Yangtze) River. Continental Shelf Research 28, 1483–1489.