Hostname: page-component-7bb8b95d7b-fmk2r Total loading time: 0 Render date: 2024-09-19T16:09:32.301Z Has data issue: false hasContentIssue false
  • English
  • Français

Genetic variation of Oratosquilla oratoria (Crustacea: Stomatopoda) across Hong Kong waters elucidated by mitochondrial DNA control region sequences

Published online by Cambridge University Press:  19 October 2009

Karen K.Y. Lui ,
Priscilla T.Y. Leung ,
W.C. Ng  and
Kenneth M.Y. Leung
Karen K.Y. Lui
Affiliation:
The Swire Institute of Marine Science, and Division of Ecology & Biodiversity, School of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, People's Republic of China
Get access Rights & Permissions [Opens in a new window]

Abstract

The population genetic structure of the mantis shrimp, Oratosquilla oratoria, in Hong Kong waters was determined using 923 base pairs of mitochondrial DNA control region sequences. Samples were collected from six localities including the open-waters and sheltered bays in both the eastern and western waters of Hong Kong. Twenty-seven haplotypes were detected in 99 individuals. A high overall haplotype diversity (h = 0.886), with a low nucleotide diversity (π = 0.0026), was observed, and the haplotype minimum spanning network suggested that rapid expansion might have occurred among the total stomatopod population. Genetic homogeneity was observed over a meso-scale distance (80–100 km) whilst there were significant genetic differentiations between all pairs of the six samples. Partition of genetic variability based on hydrographic conditions did not reveal significant differentiations between: (1) eastern and western waters; and (2) open-waters and sheltered bays; but showed high levels of variation both within groups and within samples. Unexpectedly, genetic distance did not correlate with hydrographic distance among the samples. Results demonstrated a genetic patchiness pattern of O. oratoria in Hong Kong waters that may be attributable to the interplay between hydrographic conditions (e.g. salinity) and the species' life history traits.

Keywords

stomatopodgenetic patchinessHong Kong watersCrustaceacontrol region
Type
Research Article
Information
Journal of the Marine Biological Association of the United Kingdom , Volume 90 , Issue 3 , May 2010 , pp. 623 - 631
Copyright
Copyright © Marine Biological Association of the United Kingdom 2009

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

REFERENCES

AFCD (Agriculture, Fisheries and Conservation Department) (2004) Consultation Paper on the Proposed Amendment of the Fisheries Protection Ordinance, Cap 171 for the Establishment of a Regulatory Framework for Fishing Activities in Hong Kong Waters. Hong Kong: AFCD, Hong Kong SAR Government.Google Scholar
Ahyong, S.T. (2001) Revision of the Australian stomatopod Crustacea. Records of the Australian Museum Supplement 26, 8–193.Google Scholar
Avise, J.C. (2000) Phylogeography: the history and formation of species. Massachusetts: Harvard University Press.CrossRefGoogle Scholar
Bagley, M.J. and Gall, A.E. (1998) Mitochondrial and nuclear DNA sequence variability among populations of rainbow trout (Oncorhynchus mykiss). Molecular Ecology 7, 945–961.CrossRefGoogle ScholarPubMed
Barber, P.H., Moosa, M.K. and Palumbi, S.R. (2002a) Rapid recovery of genetic diversity of stomatopod populations on Krakatau: temporal and spatial scales of marine larval dispersal. Proceedings of the Royal Society of London 269, 1591–1597.CrossRefGoogle ScholarPubMed
Barber, P.H., Palumbi, S.R., Erdmann, M.V. and Moosa, M.K. (2002b) Sharp genetic breaks among populations of Haptosquilla pulchella (Stomatopoda) indicate limits to larval transport: patterns, causes, and consequences. Molecular Ecology 11, 659–674.CrossRefGoogle ScholarPubMed
Bilton, D.T., Paula, J. and Bishop, J.D.D. (2002) Dispersal, genetic differentiation and speciation in estuarine organisms. Estuarine, Coastal and Marine Science 55, 937–952.CrossRefGoogle Scholar
Burton, R.S. and Feldman, M. (1982) Population genetics of coastal and estuarine invertebrates: does larval behaviour influence population structure? In Kennedy, V.S. (ed.) Estuarine comparisons. New York: Academic Press, pp. 537–551.CrossRefGoogle Scholar
Clement, K.A., Posada, D. and Crandall, K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology 9, 1657–1659.CrossRefGoogle ScholarPubMed
Crandall, K.A., Templeton, A.R. and Sing, C.F. (1994) Intraspecific cladogram estimation: problems and solutions. In Scotland, R.W., Siebert, D.J. and Williams, D.M. (eds) Models in phylogeny and reconstruction. Oxford: Clarendon Press, pp. 273–297.CrossRefGoogle Scholar
Dame, R.F. and Allen, D.M. (1996) Between estuaries and the sea. Journal of Experimental Marine Biology and Ecology 200, 169–185.CrossRefGoogle Scholar
Excoffier, L., Laval, G. and Schneider, S. (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47–50.Google Scholar
Guo, S.W. and Thompson, E.A. (1992) Performing the exact test of Hardy–Weinberg proportion for multiple alleles. Biometrics 48, 361–372.CrossRefGoogle ScholarPubMed
Hamano, T. and Matsuura, S. (1987) Egg size, duration of incubation, and larval development of the Japanese mantis shrimp in the laboratory. Bulletin of the Japanese Society of Scientific Fisheries 53, 23–39.CrossRefGoogle Scholar
Hauser, L., Adcock, G.J., Smith, P., Bernal Ramirez, J.H. and Carvalho, R. (2002) Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proceedings of the National Academy of Sciences of the United States of America 99, 11742–11747.CrossRefGoogle Scholar
Hedgecock, D. (1986) Is gene flow from pelagic larval dispersal important in the adaptation and evolution of marine invertebrates? Bulletin of Marine Science 39, 550–565.Google Scholar
Hedgecock, D., Launey, S., Pudovkin, A.I., Naciri, Y., Lapègue, S. and Bonhomme, F. (2007) Small effective number of parents (N b ) inferred for a naturally spawned cohort of juvenile European flat oysters Ostrea edulis. Marine Biology 150, 1173–1182.CrossRefGoogle Scholar
Hellberg, M.E., Burton, R.S., Neigel, J.E. and Palumbi, S.R. (2002) Genetic assessment of connectivity among marine populations. Bulletin of Marine Science 70, S273–290.Google Scholar
Hoelzel, A.R. and Green, A. (1992) Analysis of population-level variation by sequencing PCR-amplified DNA. In Hoelzel, A.R. (ed.) Molecular genetic analysis of populations: a practical approach. Oxford: Oxford University Press, pp. 159–186.Google Scholar
Johannesson, K., Johannesson, B. and Lundgren, U. (1995) Strong natural-selection causes microscale allozyme variation in a marine snail. Proceedings of the National Academy of Sciences of the United States of America 92, 2602–2606.CrossRefGoogle Scholar
Johnson, M.S. and Black, R. (1982) Chaotic genetic patchiness in an intertidal limpet, Siphonaria sp. Marine Biology 70, 157–164.CrossRefGoogle Scholar
Johnson, M.S. and Black, R. (1984) Pattern beneath the chaos: the effect of recruitment on genetic patchiness in an intertidal limpet. Evolution 38, 1371–1383.CrossRefGoogle Scholar
Kenchington, E., Heino, M. and Nielsen, E.E. (2003) Managing marine genetic diversity: time for action? ICES Journal of Marine Science 60, 1172–1176.CrossRefGoogle Scholar
Kodama, K., Horiguchi, T., Kume, G., Nagayama, S., Shimizu, T., Shiraishi, H., Morita, M. and Shimizu, M. (2006) Effects of hypoxia on early life history of the stomatopod Oratosquilla oratoria in a coastal sea. Marine Ecology Progress Series 324, 197–206.CrossRefGoogle Scholar
Kordos, L.M. and Burton, R.S. (1993) Genetic differentiation of Texas Gulf Coast populations of the blue crab Callinectes sapidus. Marine Biology 117, 227–233.CrossRefGoogle Scholar
Kumur, S.Tamura, K. and Nei, M. (2004) MEGA 3.1: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5, 150–163.CrossRefGoogle Scholar
Leung, T.Y. (2002) The ecology and reproductive biology of two intertidal barnacles, Capitulum mitella and Ibla cumingi (Cirripedia: Pedunculata), in Hong Kong. PhD thesis. The University of Hong Kong, Hong Kong.Google Scholar
Leung, A.W.Y. (2003) Overfishing and the fishing industry in Hong Kong. In Morton, B. (ed.) Perspectives on marine environmental change in Hong Kong, 1977–2001. Hong Kong: Hong Kong University Press, pp. 719–743.Google Scholar
Li, G. and Hedgecock, D. (1998) Genetic heterogeneity, detected by PCR-SSCP, among samples of larval Pacific oysters (Crassostrea gigas) supports the hypothesis of large variance in reproductive success. Canadian Journal of Fisheries and Aquatic Sciences 55, 1025–1033.CrossRefGoogle Scholar
Lindstrom, K.S. (2003) Aspects of behaviour, population genetics, and phylogeny of stomatopod crustaceans. PhD thesis. The University of California, Berkeley, USA.Google Scholar
Lui, K.K.Y. (2005) Ecology of commercially important stomatopods in Hong Kong. MPhil thesis. The University of Hong Kong, Hong Kong.Google Scholar
Lui, K.K.Y., Ng, J.S.S. and Leung, K.M.Y. (2007) Spatio-temporal variations in diversity and abundance of commercially important Decapoda and Stomatopoda in subtropical Hong Kong Waters. Estuarine, Coastal and Shelf Science 72, 635–647.CrossRefGoogle Scholar
Lundy, C.J., Rico, C. and Hewitt, G.M. (2000) Temporal and spatial genetic variation in spawning grounds of European hake (Merluccius merluccius) in the Bay of Biscay. Molecular Ecology 9, 2067–2079.CrossRefGoogle ScholarPubMed
Maes, G.E., Pujolar, J.M., Hellemans, B. and Volckaert, F.A.M. (2006) Evidence for isolation by time in the European eel (Anguilla anguilla L.). Molecular Ecology 15, 2095–2107.CrossRefGoogle ScholarPubMed
McEdward, L. (1995) The ecology of marine invertebrate larvae. Boca Raton, FL: CRC Press.Google Scholar
Meyer, A. (1994) Molecular phylogenetic studies of fish. In Beaumont, A.R. (ed.) Genetics and evolution of aquatic organisms. London: Chapman & Hall, pp. 219–249.Google Scholar
Morgan, S.A. (1995) Life and death in the plankton: larval mortality and adaptation. In: McEdward, L. (ed.) Ecology of marine invertebrate larvae. New York: CRC Press, pp. 279–322.Google Scholar
Morgan, S.G. and Goy, J.W. (1987) Reproduction and larval development of the mantis shrimp Gonodactylus bredini (Crustacea: Stomatopoda) maintained in the laboratory. Journal of Crustacean Biology 7, 595–618.CrossRefGoogle Scholar
Morton, B. and Blackmore, G. (2001) South China Sea. Marine Pollution Bulletin 42, 1236–1263.CrossRefGoogle ScholarPubMed
Morton, B. and Morton, J. (1983) The sea shore ecology of Hong Kong. Hong Kong: Hong Kong University Press.CrossRefGoogle Scholar
Ng, W.C. and Morton, B. (2003) Genetic structure of the scleractinian coral Platygyra sinensis in Hong Kong. Marine Biology 143, 963–968.CrossRefGoogle Scholar
Nei, M. (1987) Molecular evolutionary genetics. New York: Columbia University Press.CrossRefGoogle Scholar
Palumbi, S.R. (1994) Genetic divergence, reproductive isolation, and marine speciation. Annual Review of Ecology and Systematics 25, 547–572.CrossRefGoogle Scholar
Palumbi, S.R. (2003) Population genetics, demographic connectivity, and the design of marine reserves. Ecological Applications 13, 146–158.CrossRefGoogle Scholar
Perrin, C., Wing, S.R. and Roy, M.S. (2004) Effects of hydrographic barriers on population genetic structure of the sea star Coscinasterias muricata (Echinodermata, Asteroidea) in the New Zealand fjords. Molecular Ecology 13, 2183–2195.CrossRefGoogle Scholar
Provenzano, A.J. and Manning, R.B. (1978) Studies on development of stomatopod crustacean II. The later larval stages of Gonodactylus oerstedii (Hansen) reared in the laboratory. Bulletin of Marine Science 28, 297–315.Google Scholar
Reaka, M.L. and Manning, R.B. (1981) The behaviour of stomatopod crustaceans and its relationship to rates of evolution. Journal of Crustacean Biology 1, 309–327.CrossRefGoogle Scholar
Refseth, U.H., Nesbø, C.L., Stacy, J.E., Vøllestad, L.A., Fjeld, E. and Jakobsen, K.S. (1998) Genetic evidence for different migration routes of freshwater fish into Norway revealed by analysis of current perch (Perca fluviatilis) populations in Scandinavia. Molecular Ecology 7, 1015–1027.CrossRefGoogle ScholarPubMed
Robichaux, D.M., Cohen, A.C., Reaka, M.L. and Allen, D. (1981) Experiments with zooplankton on coral reefs, or, will the real demersal plankton please come up? Marine Ecology 2, 77–94.CrossRefGoogle Scholar
Roughgarden, J., Gaines, S. and Possingham, H. (1988) Recruitment dynamics and complex life cycles. Science 241, 1460–1466.CrossRefGoogle ScholarPubMed
Selkoe, K.A., Gaines, S.D., Caselle, J.E. and Warner, R.R. (2006) Current shifts and kin aggregation explain genetic patchiness in fish recruits. Ecology 87, 3082–3094.CrossRefGoogle ScholarPubMed
Slatkin, M. and Hudson, R.R. (1991) Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129, 555–562.CrossRefGoogle ScholarPubMed
Tajima, F. (1983) Evolutionary relationship of DNA sequences in finite populations. Genetics 105, 437–460.CrossRefGoogle ScholarPubMed
Tzeng, T.D., Yeh, S.Y. and Hui, C.F. (2004) Population genetic structure of the Kuruma prawn (Penaeus japonicus) in East Asia inferred from mitochondrial DNA sequences. ICES Journal of Marine Science 61, 912–920.CrossRefGoogle Scholar
Watts, R.J., Johnson, M.S. and Black, R. (1990) Effects of recruitment on genetic patchiness in the urchin Echinometra mathaei in Western Australia. Marine Biology 105, 145–151.CrossRefGoogle Scholar
Wright, S. (1951) The genetical structure of populations. Annals of Eugenics 15, 323–354.CrossRefGoogle ScholarPubMed
Yin, K. and Harrison, P.J. (2007) Influence of the Pearl River estuary and vertical mixing in Victoria Harbor on water quality in relation to eutrophication impacts in Hong Kong waters. Marine Pollution Bulletin 54, 646–656.CrossRefGoogle ScholarPubMed
Yin, K.D., Lin, Z.F. and Ke, Z.Y. (2004) Temporal and spatial distribution of dissolved oxygen in the Pearl River Estuary and adjacent coastal waters. Continental Shelf Research 24, 1935–1948.CrossRefGoogle Scholar
Young, C.M. (1995) Behavior and locomotion during the dispersal phase of larval life. In McEdward, L. (ed.) Ecology of marine larvae. New York: CRC Press, pp. 249–278.Google Scholar