Hostname: page-component-8448b6f56d-jr42d Total loading time: 0 Render date: 2024-04-24T07:29:41.544Z Has data issue: false hasContentIssue false

Active suspensions in thin films: nutrient uptake and swimmer motion

Published online by Cambridge University Press:  25 September 2013

Ruth A. Lambert
Affiliation:
Linné Flow Centre, KTH Mechanics, SE-100 44, Stockholm, Sweden
Francesco Picano
Affiliation:
Linné Flow Centre, KTH Mechanics, SE-100 44, Stockholm, Sweden
Wim-Paul Breugem
Affiliation:
Delft University of Technology, Laboratory for Aero and Hydrodynamics, Leeghwaterstraat 21, NL-2628 CA Delft, The Netherlands
Luca Brandt*
Affiliation:
Linné Flow Centre, KTH Mechanics, SE-100 44, Stockholm, Sweden SeRC, Swedish e-Science Research Centre, KTH Mechanics, SE-100 44, Stockholm, Sweden
*
Email address for correspondence: luca@mech.kth.se

Abstract

A numerical study of swimming particle motion and nutrient transport is conducted for a semidilute to dense suspension in a thin film. The steady squirmer model is used to represent the motion of living cells in suspension with the nutrient uptake by swimming particles modelled using a first-order kinetic equation representing the absorption process that occurs locally at the particle surface. An analysis of the dynamics of the neutral squirmers inside the film shows that the vertical motion is reduced significantly. The mean nutrient uptake for both isolated and populations of swimmers decreases for increasing swimming speeds when nutrient advection becomes relevant as less time is left for the nutrient to diffuse to the surface. This finding is in contrast to the case where the uptake is modelled by imposing a constant nutrient concentration at the cell surface and the mass flux results to be an increasing monotonic function of the swimming speed. In comparison to non-motile particles, the cell motion has a negligible influence on nutrient uptake at lower particle absorption rates since the process is rate limited. At higher absorption rates, the swimming motion results in a large increase in the nutrient uptake that is attributed to the movement of particles and increased mixing in the fluid. As the volume fraction of swimming particles increases, the squirmers consume slightly less nutrients and require more power for the same swimming motion. Despite this increase in energy consumption, the results clearly demonstrate that the gain in nutrient uptake make swimming a winning strategy for micro-organism survival also in relatively dense suspensions.

Type
Papers
Copyright
©2013 Cambridge University Press 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Berke, A. P., Turner, L., Berg, H. C. & Lauga, E. 2008 Hydrodynamic attraction of swimming microorganisms by surfaces. Phys. Rev. Lett. 101, 038102.CrossRefGoogle ScholarPubMed
Blake, J. R. 1971 A spherical envelope approach to ciliary propulsion. J. Fluid Mech. 46, 199208.Google Scholar
Brenner, H. 1961 The slow motion of a sphere through a viscous fluid towards a plane surface. Chem. Engng Sci. 16, 242251.Google Scholar
Breugem, W.-P. 2010 A combined soft-sphere collision/immersed boundary method for resolved simulations of particulate flows. In Proceedings of the ASME 2010 3rd Joint US–European Fluids Engineering Summer Meeting and 8th International Conference on Nanochannels, Microchannels, and Minichannels, Montreal, Canada, p. 11.Google Scholar
Breugem, W.-P. 2012 A second-order accurate immersed boundary method for fully resolved simulations of particle-laden flows. J. Comput. Phys. 231 (13), 44694498.Google Scholar
Dance, S. L. & Maxey, M. R. 2003 Incorporation of lubrication effects into the force-coupling method for particulate two-phase flows. J. Comput. Phys. 189, 212238.Google Scholar
Doostmohammadi, A., Stocker, R. & Ardekani, A. M. 2012 Low-Reynolds-number swimming at pycnoclines. Proc. Natl Acad. Sci. USA 109 (10), 38563861.Google Scholar
Downton, M. T. & Stark, H. 2009 Simulation of a model microswimmer. J. Phys.: Condens. Matter 21, 204101.Google Scholar
Evans, A. A., Ishikawa, T., Yamaguchi, T. & Lauga, E. 2011 Orientational order in concentrated suspensions of spherical microswimmers. Phys. Fluids 23 (11), 111702.Google Scholar
Hernandez-Ortiz, J. P., Stoltz, C. G. & Graham, M. D. 2005 Transport and collective dynamics in suspensions of confined swimming particles. Phys. Rev. Lett. 95, 204501.Google Scholar
Van der Hoef, M. A., Ye, M., Van Sint Annaland, M., Andrews, A. T. IV, Sundaresan, S. & Kuipers, J. A. M. 2006 Multi-scale modelling of gas-fluidized beds. Adv. Chem. Engng 31, 65149.Google Scholar
Ishikawa, T., Locsei, J. T. & Pedley, T. J. 2008 Development of coherent structures in concentrated suspensions of swimming model micro-organisms. J. Fluid Mech. 615, 401431.Google Scholar
Ishikawa, T., Locsei, J. T. & Pedley, T. J. 2010 Fluid particle diffusion in a semidilute suspension of model micro-organisms. Phys. Rev. E 82 (2), 021408.Google Scholar
Ishikawa, T. & Pedley, T. J. 2007a Diffusion of swimming model micro-organisms in a semi-dilute suspension. J. Fluid Mech. 588, 437462.Google Scholar
Ishikawa, T. & Pedley, T. J. 2007b The rheology of a semi-dilute suspension of swimming model micro-organisms. J. Fluid Mech. 588, 399435.Google Scholar
Ishikawa, T. & Pedley, T. J. 2008 Coherent structures in monolayers of swimming particles. Phys. Rev. Lett. 100 (8), 088103.CrossRefGoogle ScholarPubMed
Ishikawa, T., Simmonds, M. P. & Pedley, T. J. 2006 Hydrodynamic interaction of two swimming model micro-organisms. J. Fluid Mech. 568, 119160.CrossRefGoogle Scholar
Ishikawa, T., Yoshida, N., Ueno, H., Wiedeman, M., Imai, Y. & Yamaguchi, T. 2011 Energy transport in a concentrated suspension of bacteria. Phys. Rev. Lett. 107, 028102.Google Scholar
Jeffrey, D. J. 1982 Low-Reynolds-number flow between converging spheres. Mathematika 29, 5866.Google Scholar
Johnson, K. L. 1985 Contact Mechanics. Cambridge University Press.Google Scholar
Joseph, G. G., Zenit, R., Hunt, M. L. & Rosenwinkel, A. M. 2006 Particle–wall collisions in a viscous fluid. J. Fluid Mech. 443, 329346.Google Scholar
Koch, D. L. & Subramanian, G. 2011 Collective hydrodynamics of swimming microorganisms: living fluids. Annu. Rev. Fluid Mech. 43, 637659.Google Scholar
Kurtuldu, H., Guasto, J. S., Johnson, K. A. & Gollub, J. P. 2011 Enhancement of biomixing by swimming algal cells in two-dimensional films. Proc. Natl Acad. Sci. USA 108 (26), 1039110395.Google Scholar
Ladd, A. J. C. & Verberg, R. 2001 Lattice–Boltzmann simulations of particle–fluid suspensions. J. Stat. Phys. 104, 11911251.Google Scholar
Legendre, D., Daniel, C. & Guiraud, P. 2005 Experimental study of a drop bouncing on a wall in a liquid. Phys. Fluids 17 (097105).Google Scholar
Li, G., Bensson, J., Nisimova, L., Munger, D., Mahautmr, P., Tang, J. X., Maxey, M. R. & Brun, Y. V. 2011 Accumulation of swimming bacteria near a solid surface. Phys. Rev. E 84 (4), 041932.Google Scholar
Lighthill, M. J. 1952 On the squirming motion of nearly spherical deformable bodies through liquids at very small Reynolds numbers. Commun. Pure Appl. Maths 5, 109118.Google Scholar
Lin, Z., Thiffeault, J.-L. & Childress, S. 2011 Stirring by squirmers. J. Fluid Mech. 669, 167177.Google Scholar
Magar, V., Goto, T. & Pedley, T. J. 2003 Nutrient uptake by a self-propelled steady squirmer. Q. J. Mech. Appl. Math 56 (1), 6591.Google Scholar
Magar, V. & Pedley, T. J. 2005 Average nutrient uptake by a self-propelled unsteady squirmer. J. Fluid Mech. 539, 93112.Google Scholar
Michelin, S. & Lauga, E. 2011 Optimal feeding is optimal swimming for all Péclet numbers. Phys. Fluids 23 (10), 101901.Google Scholar
Mittal, R. & Iaccarino, G. 2005 Immersed boundary methods. Annu. Rev. Fluid Mech. 37, 239261.Google Scholar
Musielak, M. M., Karp-Boss, L., Jumars, P. A. & Fauci, L. J. 2009 Nutrient transport and acquisition by diatom chains in a moving fluid. J. Fluid Mech. 638, 401421.Google Scholar
O’Neill, M. E. 1970 Exact solutions of the equations of slow viscous flow generated by the asymmetrical motion of two equal spheres. Appl. Sci. Res. 21, 452465.Google Scholar
Pedley, T. J. & Kessler, J. O. 1992 Hydrodynamic phenomena in suspensions of swimming microorganisms. Annu. Rev. Fluid Mech. 24 (1), 313358.Google Scholar
Peskin, C. S. 1972 Flow patterns around heart valves: a numerical method. J. Comput. Phys. 10 (2), 252271.Google Scholar
Peskin, C. S. 2002 The immersed boundary method. Acta Numerica 11, 479517.Google Scholar
Saintillan, D. & Shelley, M. J. 2007 Orientational order and instabilities in suspensions of self-locomoting rods. Phys. Rev. Lett. 99, 058102.Google Scholar
Short, M. B., Solari, C. A., Ganguly, S., Powers, T. R., Kessler, J. O. & Goldstein, R. E. 2006 Flows driven by flagella of multicellular organisms enhance long-range molecular transport. Proc. Natl Acad. Sci. USA 103 (22), 83158319.Google Scholar
Spagnolie, S. E. & Lauga, E. 2012 Hydrodynamics of self-propulsion near a boundary: predictions and accuracy of far-field approximations. J. Fluid Mech. 700, 105147.Google Scholar
Taherzadeh, D., Picioreanu, C. & Horn, H. 2012 Mass transfer enhcancement in moving biofilm structures. Biophys. J. 102 (7), 14831492.CrossRefGoogle ScholarPubMed
Uhlmann, M. 2005 An immersed boundary method with direct forcing for simulation of particulate flows. J. Comput. Phys. 209, 448476.Google Scholar
Underhill, P. T., Hernandez-Ortiz, J. P. & Graham, M. D. 2008 Diffusion and spatial correlations in suspensions of swimming particles. Phys. Rev. Lett. 100 (24), 248101.Google Scholar
Wu, X.-L. & Libchaber, A. 2000 Particle diffusion in a quasi-two-dimensional bacterial bath. Phys. Rev. Lett. 84, 30173020.Google Scholar
Yeo, K. & Maxey, M. R. 2010 Dynamics of concentrated suspensions of non-colloidal particles in couette flow. J. Fluid Mech. 649, 205231.Google Scholar
Zhu, L., Do-Quang, M., Lauga, E. & Brandt, L. 2011 Locomotion by tangential deformation in a polynumeric fluid. Phys. Rev. E 83, 011901.Google Scholar
Zhu, L., Lauga, E. & Brandt, L. 2012 Self-propulsion in viscoelastic fluids: pushers vs. pullers. Phys. Fluids 24, 051902.Google Scholar
Zhu, L., Lauga, E. & Brandt, L. 2013 Low-Reynolds number swimming in a capillary tube. J. Fluid Mech. 726, 285311.Google Scholar