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Use of a single-strand conformation polymorphism analysis to perform a simple genotyping of bovine κ-casein A and B variants

Published online by Cambridge University Press:  01 November 1997

ANGEL BARROSO
Affiliation:
Departamento de Producción Animal, Facultad de Veterinaria, Universidad Complutense, E-28040 Madrid, España
SUSANA DUNNER
Affiliation:
Departamento de Producción Animal, Facultad de Veterinaria, Universidad Complutense, E-28040 Madrid, España
JAVIER CAÑON
Affiliation:
Departamento de Producción Animal, Facultad de Veterinaria, Universidad Complutense, E-28040 Madrid, España

Abstract

We propose an alternative method for casein genotyping, generally carried out using polymerase chain reaction followed by restriction fragment length polymorphism analysis. Application of the single-strand conformation polymorphism technique detects nucleotide changes in the fragment amplified by means of polymerase chain reaction and thus avoids the use of restriction enzymes. A 453 bp fragment from exon IV of κ-casein has been amplified. The two variants (A and B), found with the highest frequencies in most bovine breeds and included in some dairy cattle selection schemes, can be discriminated using single-strand conformation polymorphism analysis of heat denatured fragments in acrylamide–bis-acrylamide (100[ratio ]1) gels followed by silver staining. κ-Casein genotyping is therefore simplified, although variants A and E on the one hand, and B and C on the other, are not distinguishable with this technique.

Type
Research Article
Copyright
Proprietors of Journal of Dairy Research 1997

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