Hambly, E, et al.
The viriosphere, diversity, and genetic exchange within phage communities. Current Opinion in Microbiology
2005; 8: 444–450.
Lepage, P, et al.
A metagenomic insight into our gut's microbiome. Gut
2013; 62: 146–158.
Delzenne, NM, et al.
Targeting gut microbiota in obesity: effects of prebiotics and probiotics. Nature Reviews Endocrinology
2011; 7: 639–646.
Sack, BS, et al.
Isolation of entertoxigenic Bacteroides fragilis from Bangladeshi children with diarrhea: a controlled study. Journal of Clinical Microbiology
1994; 32: 960–963.
Kimura, I, et al.
The gut microbiota suppresses insulin-mediated fat accumulation via the short-chain fatty acid receptor GPR43. Nature Communications
2013; 4: 1829.
Hansen, TH, et al.
The gut microbiome in cardio-metabolic health. Genome Medicine
2015; 7: 33.
Waller, AS, et al.
Classification and quantification of bateriophage taxa in human gut metagenomes. ISME Journal
2014; 8: 1391–1402.
Wagner, J, et al.
Bacteriophages in gut samples from pediatric Crohn's disease patients: metagenomic analysis using 454 pyrosequencing. Inflammatory Bowel Diseases
2013; 19: 1598–1608.
Dutilh, BE, et al.
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes. Nature Communications
2014; 5: 4498.
Penadés, JR, et al.
Bacteriophage-mediated spread of bacterial virulence genes. Current Opinion in Microbiology
2015; 23: 171–178.
Davis, BM, et al.
Filamentous phages linked to virulence of Vibrio cholerae
. Current Opinion in Microbiology
2003; 6: 35–42.
Carrolo, M, et al.
Prophage spontaneous activation promotes DNA release enhancing biofilm formation in Streptococcus pneumoniae
. PLoS ONE
2010; 5: e15678.
Tamura, K, et al.
MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular Biology Evolution
2013; 30: 2725–2729.
Wick, EC, et al.
Bacteroides spp. and diarrhea. Current Opinion in Infectious Diseases
2010; 23: 470–474.
Freeman, AD, et al.
The importance of the N-terminus of T7 endonuclease I in the interaction with DNA junctions. Journal of Molecular Biology
2013; 425: 395–410.
Nafissi, N, et al.
Bacteriophage recombination systems and biotechnical application. Applied Microbiology and Biotechnology
2014; 98: 2841–2851.